RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CARHSP1Q9Y2V2 147 aaKnown RBP11.65□□□□□ -0.54
CHD1L-208ENST00000488864 RELNP78509 3460 aa11.65□□□□□ -0.54
CHD1L-208ENST00000488864 MEX3AA1L020 520 aaKnown RBP11.65□□□□□ -0.55
CHD1L-208ENST00000488864 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 TXNDC12O95881 172 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 NAT2P11245 290 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 APEHP13798 732 aaKnown RBP11.65□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF708P17019 499 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 CSNK2A1P68400 391 aaPredicted RBP11.65□□□□□ -0.55
CHD1L-208ENST00000488864 SLC17A1Q14916 467 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 WDFY1Q8IWB7 410 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 Q8NA96 180 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 INO80EQ8NBZ0 244 aaPredicted RBP11.65□□□□□ -0.55
CHD1L-208ENST00000488864 ADAD2Q8NCV1 583 aaKnown RBP11.65□□□□□ -0.55
CHD1L-208ENST00000488864 OTOSQ8NHW6 89 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 OR8B4Q96RC9 309 aa11.65□□□□□ -0.55
CHD1L-208ENST00000488864 HLA-GP17693 338 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 CENPAP49450 140 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 RAC3P60763 192 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 H3F3AP84243 136 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 SPAG16Q8N0X2 631 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 CISD2Q8N5K1 135 aaKnown RBP11.64□□□□□ -0.55
CHD1L-208ENST00000488864 GVQW1Q8N7I0 195 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 MITD1Q8WV92 249 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 CNTNAP3BQ96NU0 1288 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 PRORYQ9H606 182 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 TREM1Q9NP99 234 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 TMEM100Q9NV29 134 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 FAM96BQ9Y3D0 163 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 NBASA2RRP1 2371 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 KALRNO60229 2985 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 TMEM8BA6NDV4 472 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 AQP7P3A6NL99 342 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 EIF3GO75821 320 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHD1L-208ENST00000488864 RENP00797 406 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 IL2RAP01589 272 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 APOC1P02654 83 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 S100A12P80511 92 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 MST1LQ2TV78 715 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 OR52W1Q6IF63 320 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 FDX2Q6P4F2 183 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 ACBD4Q8NC06 268 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 DMBX1Q8NFW5 382 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 TMED6Q8WW62 240 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 ASB5Q8WWX0 329 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 CMBLQ96DG6 245 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 ZFP57Q9NU63 452 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 DHDHQ9UQ10 334 aa11.64□□□□□ -0.55
CHD1L-208ENST00000488864 USP24Q9UPU5 2620 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 GTF3C1Q12789 2109 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 C13orf42A0A1B0GVH6 325 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 F8VVB4 439 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 F8VWA3 439 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 IGHG3P01860 377 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 IL13RA1P78552 427 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF584Q8IVC4 421 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 ABHD3Q8WU67 409 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 SFT2D1Q8WV19 159 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 RRNAD1Q96FB5 475 aaKnown RBP11.63□□□□□ -0.55
CHD1L-208ENST00000488864 CPNE2Q96FN4 548 aaPredicted RBP11.63□□□□□ -0.55
CHD1L-208ENST00000488864 MICU1Q9BPX6 476 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 CYTL1Q9NRR1 136 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 B9D1Q9UPM9 204 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 TMEM14AQ9Y6G1 99 aa11.63□□□□□ -0.55
CHD1L-208ENST00000488864 LDLRAD4O15165 306 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 LMX1BO60663 402 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 EIF1BO60739 113 aaKnown RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF43P17038 809 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 AKR1C4P17516 323 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 IGFBP3P17936 291 aaPredicted RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 VAMP1P23763 118 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 PDZK1IP1Q13113 114 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 LY6DQ14210 128 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 PRR30Q53SZ7 412 aaPredicted RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 AVPI1Q5T686 147 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 FJX1Q86VR8 437 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 FNDC9Q8TBE3 224 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ARL11Q969Q4 196 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 FOXRED1Q96CU9 486 aaPredicted RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 WDYHV1Q96HA8 205 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 SLCO5A1Q9H2Y9 848 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ERCC1P07992 297 aaPredicted RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ACAA1P09110 424 aaPredicted RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 SPARCP09486 303 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 RPL27P61353 136 aaKnown RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ZP4Q12836 540 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF239Q16600 458 aaKnown RBP11.62□□□□□ -0.55
CHD1L-208ENST00000488864 NKAPLQ5M9Q1 402 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 FAM180AQ6UWF9 173 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 ADGRE4PQ86SQ3 457 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 RTN4RL2Q86UN3 420 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms