RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PEBP4Q96S96 227 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 ELOVL6Q9H5J4 265 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 FAM60AQ9NP50 221 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 SIGLEC1Q9BZZ2 1709 aa1.52□□□□□ -2.17
SMC4-207ENST00000467263 BAZ1BQ9UIG0 1483 aaKnown RBP1.51□□□□□ -2.17
SMC4-207ENST00000467263 IGKV1OR2-108A0A075B7D4 117 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 GOLGA8JA6NMD2 632 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 H3BQ85 93 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 MPDU1O75352 247 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 ENTPD6O75354 484 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 CATP04040 527 aaKnown RBP1.51□□□□□ -2.17
SMC4-207ENST00000467263 GOLGA8HP0CJ92 632 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 PTMSP20962 102 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 FUSP35637 526 aaKnown RBP eCLIP1.51□□□□□ -2.17
SMC4-207ENST00000467263 ERFP50548 548 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 FOXA1P55317 472 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 IDI1Q13907 227 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 TRMT10CQ7L0Y3 403 aaKnown RBP1.51□□□□□ -2.17
SMC4-207ENST00000467263 TMEM144Q7Z5S9 345 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 APRG1Q8IVJ8 170 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 ZCCHC24Q8N2G6 241 aaKnown RBP1.51□□□□□ -2.17
SMC4-207ENST00000467263 CA5BP1Q8WTZ4 195 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 TSEN15Q8WW01 171 aaKnown RBP1.51□□□□□ -2.17
SMC4-207ENST00000467263 Q96MT0 163 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 COL11A1P12107 1806 aaPredicted RBP1.51□□□□□ -2.17
SMC4-207ENST00000467263 CACNA1GO43497 2377 aa1.51□□□□□ -2.17
SMC4-207ENST00000467263 A0A0B4J2E0 115 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 CCDC169A6NNP5 214 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 SYNGR2O43760 224 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 DNAJB6O75190 326 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 GNRHRP30968 328 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 GPR1P46091 355 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 TUFMP49411 452 aaKnown RBP1.5□□□□□ -2.17
SMC4-207ENST00000467263 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 TPBGQ13641 420 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 KIF2BQ8N4N8 673 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 C8orf31Q8N9H6 132 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 FAM57AQ8TBR7 257 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 ZNF75AQ96N20 296 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 C11orf70Q9BRQ4 267 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 RAB23Q9ULC3 237 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 OR51B2Q9Y5P1 312 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 DOCK6Q96HP0 2047 aa1.5□□□□□ -2.17
SMC4-207ENST00000467263 COL5A3P25940 1745 aaPredicted RBP1.49□□□□□ -2.17
SMC4-207ENST00000467263 NUP205Q92621 2012 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 TRAV8-6A0A0B4J262 113 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 A0A1W2PRD5 423 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 CTAG2O75638 210 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 UPK1BO75841 260 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 CXorf1O96002 111 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 TACSTD2P09758 323 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 CBR1P16152 277 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 BEX3Q00994 111 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 IRF8Q02556 426 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 RAD51Q06609 339 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 MRPL2Q5T653 305 aaKnown RBP1.49□□□□□ -2.17
SMC4-207ENST00000467263 NDUFAF7Q7L592 441 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 FAM122BQ7Z309 247 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 OFCC1Q8IZS5 231 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 EIF4E3Q8N5X7 224 aaKnown RBP1.49□□□□□ -2.17
SMC4-207ENST00000467263 SMARCD1Q96GM5 515 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 C9orf72Q96LT7 481 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 OPALINQ96PE5 141 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 API5Q9BZZ5 524 aaKnown RBP1.49□□□□□ -2.17
SMC4-207ENST00000467263 NAA50Q9GZZ1 169 aaKnown RBP1.49□□□□□ -2.17
SMC4-207ENST00000467263 ARV1Q9H2C2 271 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 CYP3A43Q9HB55 503 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 LYRM4Q9HD34 91 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 TMEM38BQ9NVV0 291 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 RAB20Q9NX57 234 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 TBC1D24Q9ULP9 559 aa1.49□□□□□ -2.17
SMC4-207ENST00000467263 SETD1AO15047 1707 aaKnown RBP1.49□□□□□ -2.17
SMC4-207ENST00000467263 JCADQ9P266 1359 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 IGLL5B9A064 214 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 OVOL1O14753 267 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 ZBTB5O15062 677 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 SIVA1O15304 175 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 ZNF73O43830 326 aaPredicted RBP1.48□□□□□ -2.17
SMC4-207ENST00000467263 LCA5LO95447 670 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 PTTG1O95997 202 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 CDK1P06493 297 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 CTSGP08311 255 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 C5orf64Q2M2E5 130 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 LGALSLQ3ZCW2 172 aaPredicted RBP1.48□□□□□ -2.17
SMC4-207ENST00000467263 BEX5Q5H9J7 111 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 TMPPEQ6ZT21 453 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 ZDHHC22Q8N966 263 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 CYB561A3Q8NBI2 242 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 STMN4Q9H169 189 aaPredicted RBP1.48□□□□□ -2.17
SMC4-207ENST00000467263 RDH14Q9HBH5 336 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 CD209Q9NNX6 404 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 MRPS30Q9NP92 439 aaKnown RBP1.48□□□□□ -2.17
SMC4-207ENST00000467263 ZC4H2Q9NQZ6 224 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 VAX2Q9UIW0 290 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 SPATA31E1Q6ZUB1 1445 aa1.48□□□□□ -2.17
SMC4-207ENST00000467263 LRRIQ4A6NIV6 560 aa1.47□□□□□ -2.17
SMC4-207ENST00000467263 HACD1B0YJ81 288 aa1.47□□□□□ -2.17
SMC4-207ENST00000467263 GGTLC3B5MD39 225 aa1.47□□□□□ -2.17
SMC4-207ENST00000467263 GFAPP14136 432 aa1.47□□□□□ -2.17
SMC4-207ENST00000467263 ZNF708P17019 499 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms