RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 DAOP14920 347 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 HIST1H1TP22492 207 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 OMGP23515 440 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 PFN2P35080 140 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 RCVRNP35243 200 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 PPICP45877 212 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 GPR6P46095 362 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR1D4P47884 311 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 RFX2P48378 723 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 APOC4P55056 127 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 PROK1P58294 105 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ERVFC1-1P60608 527 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 IRF4Q15306 451 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 RSU1Q15404 277 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 DEFB115Q30KQ5 88 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 TMEM30BQ3MIR4 351 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ODF3L2Q3SX64 289 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 OTPQ5XKR4 325 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 TMEM215Q68D42 235 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 OR10K2Q6IF99 312 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZFP1Q6P2D0 407 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 IDO2Q6ZQW0 420 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 CATSPER3Q86XQ3 398 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNF676Q8N7Q3 588 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 COX18Q8N8Q8 333 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZFP41Q8N8Y5 198 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNF114Q8NC26 417 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 SLC37A2Q8TED4 501 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 SKA2Q8WVK7 121 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ZNF486Q96H40 463 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 TBX5Q99593 518 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ARHGDIGQ99819 225 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 FAAP24Q9BTP7 215 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 QTRT1Q9BXR0 403 aaKnown RBP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 SH2D2AQ9NP31 389 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ADARB2Q9NS39 739 aaKnown RBP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 RBM22Q9NW64 420 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ARMCX1Q9P291 453 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ST3GAL6Q9Y274 331 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 SLC35A3Q9Y2D2 325 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 ASB4Q9Y574 426 aa3.59□□□□□ -1.83
HMGB3P21-201ENST00000452483 IGKV1D-8A0A087WSZ0 117 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGHV1OR21-1A0A087WYE8 117 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 NPIPB9F8W1W9 429 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PROP1O75360 226 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 FRAT2O75474 233 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 UPK1BO75841 260 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR7C1O76099 320 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PAK4O96013 591 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PTHP01270 115 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 MRPL3P09001 348 aaKnown RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 IFI30P13284 250 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PAX1P15863 534 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 CXCR1P25024 350 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 ADORA2BP29275 332 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 TSPOP30536 169 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 SERPINB5P36952 375 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR3A4PP47883 348 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 RPL29P47914 159 aaKnown RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 RND2P52198 227 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 TAS2R43P59537 309 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 CDC42P60953 191 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 NAA20P61599 178 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 CDK10Q15131 360 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 SNRNP35Q16560 246 aaKnown RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PRSS8Q16651 343 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 LRRC26Q2I0M4 334 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 TRMT12Q53H54 448 aaKnown RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 CLEC12AQ5QGZ9 265 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 FAM78BQ5VT40 261 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF324BQ6AW86 544 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF441Q8N8Z8 693 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR10G9Q8NGN4 311 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR10G8Q8NGN5 311 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR6N1Q8NGY5 312 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR1P1Q8NH06 330 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 MFSD8Q8NHS3 518 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 MCFD2Q8NI22 146 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZFP90Q8TF47 636 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 SDR42E1Q8WUS8 393 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 LRRC58Q96CX6 371 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 DCUN1D1Q96GG9 259 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 ANKRD36BP1Q96IX9 119 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PGLYRP4Q96LB8 373 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 C9orf85Q96MD7 179 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF300Q96RE9 604 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 PITX2Q99697 317 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 CCDC90BQ9GZT6 254 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 DCSTAMPQ9H295 470 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 SPNS1Q9H2V7 528 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 VSIRQ9H7M9 311 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 SPANXA1Q9NS26 97 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 DEPPQ9NTK1 212 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 OCIAD1Q9NX40 245 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 CALYQ9NYX4 217 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 THYN1Q9P016 225 aa3.58□□□□□ -1.84
HMGB3P21-201ENST00000452483 POLR1DQ9Y2S0 133 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms