RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 METTL12A8MUP2 240 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 DUX1O43812 170 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF44P15621 663 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 PI3P19957 117 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SNRPEP62304 92 aaKnown RBP13.35□□□□□ -0.27
C9orf3-204ENST00000424143 GUK1Q16774 197 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 OR2A2Q6IF42 318 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 RHBDD2Q6NTF9 364 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 COMMD2Q86X83 199 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SLC38A9Q8NBW4 561 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 GJC3Q8NFK1 279 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 OR1J1Q8NGS3 322 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 PGAM5Q96HS1 289 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 Q96M66 194 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SPACA5Q96QH8 159 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 CLCC1Q96S66 551 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 PBDC1Q9BVG4 233 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 HIPK2Q9H2X6 1198 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ANXA10Q9UJ72 324 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 TCFL5Q9UL49 500 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 PADI1Q9ULC6 663 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SLCO1B1Q9Y6L6 691 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 IGHV1OR15-9A0A0B4J2B8 117 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 A0A1W2PP11 408 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 C7orf77A4D0Y5 90 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 SDCBPO00560 298 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-204ENST00000424143 TOX3O15405 576 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-204ENST00000424143 HTR3BO95264 441 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 S100A6P06703 90 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 OR8U9P0C7N5 309 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 FOLR1P15328 257 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 S100PP25815 95 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 PTGDSP41222 190 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 SLC35A1P78382 337 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 TMEM187Q14656 261 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 WDR74Q6RFH5 385 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-204ENST00000424143 LRRC18Q8N456 261 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 CADM4Q8NFZ8 388 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 OR8U1Q8NH10 309 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 STT3BQ8TCJ2 826 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 TMEM54Q969K7 222 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 SPSB1Q96BD6 273 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 AKR1E2Q96JD6 320 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 S100A13Q99584 98 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 RGCCQ9H4X1 137 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 NAA60Q9H7X0 242 aa13.34□□□□□ -0.27
C9orf3-204ENST00000424143 SEC16AO15027 2179 aa13.33□□□□□ -0.27
C9orf3-204ENST00000424143 A0A087WZY1 265 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 RER1O15258 196 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 QDPRP09417 244 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 MSR1P21757 451 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 MFAP5Q13361 173 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 SMAD4Q13485 552 aaKnown RBP13.33□□□□□ -0.28
C9orf3-204ENST00000424143 RPUSD3Q6P087 351 aaKnown RBP13.33□□□□□ -0.28
C9orf3-204ENST00000424143 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 C1QL2Q7Z5L3 287 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 FADS6Q8N9I5 356 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 OR2M3Q8NG83 312 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 C2CD4CQ8TF44 421 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 INTS12Q96CB8 462 aaKnown RBP13.33□□□□□ -0.28
C9orf3-204ENST00000424143 ABHD14BQ96IU4 210 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 C18orf12Q96KH6 178 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 LYZL4Q96KX0 146 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 ZNF2Q9BSG1 426 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-204ENST00000424143 SOX7Q9BT81 388 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 CRB3Q9BUF7 120 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 OR51M1Q9H341 326 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 VDAC3Q9Y277 283 aa13.33□□□□□ -0.28
C9orf3-204ENST00000424143 CHD9Q3L8U1 2897 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 BTBD17A6NE02 478 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 STMND1H3BQB6 276 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 RAB5AP20339 215 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 PPM1FP49593 454 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-204ENST00000424143 CFHR1Q03591 330 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 SECTM1Q8WVN6 248 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 TCTEX1D2Q8WW35 142 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 SLC35B3Q9H1N7 401 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 RPS10P5Q9NQ39 176 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 NECAP2Q9NVZ3 263 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 PRR13Q9NZ81 148 aa13.32□□□□□ -0.28
C9orf3-204ENST00000424143 H3BML4 177 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 ZFAND5O76080 213 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 DKK1O94907 266 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 VAMP5O95183 116 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 KNG1P01042 644 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 MBPP02686 304 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 FABP1P07148 127 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 DUSP1P28562 367 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 GUCA1AP43080 201 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-204ENST00000424143 OR1D5P58170 312 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 NXPH1P58417 271 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 UBE2V2Q15819 145 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 MIDNQ504T8 468 aa13.31□□□□□ -0.28
C9orf3-204ENST00000424143 AWAT1Q58HT5 328 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms