RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CHCHD2Q9Y6H1 151 aaPredicted RBP12.21□□□□□ -0.46
GAPVD1-205ENST00000394084 SPRY1O43609 319 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SNAPINO95295 136 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 PET100P0DJ07 73 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 CPT2P23786 658 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 OPRM1P35372 400 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SNAI3Q3KNW1 292 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SULF2Q8IWU5 870 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 C20orf196Q8IYI0 205 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SLC25A43Q8WUT9 341 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 TOMM40LQ969M1 308 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SHDQ96IW2 340 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 NRIP2Q9BQI9 281 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 PHF7Q9BWX1 381 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 IGHV5-10-1A0A0J9YXX1 117 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 M0R135 149 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 GLI4P10075 376 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 IL15RAQ13261 267 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 TAF9Q16594 264 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 BRICD5Q6PL45 260 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 IL34Q6ZMJ4 242 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 C2CD4CQ8TF44 421 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 MRPL24Q96A35 216 aaKnown RBP12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 ZNF799Q96GE5 643 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 CCDC74BQ96LY2 380 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 MEMO1Q9Y316 297 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 B3GALT1Q9Y5Z6 326 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 FAM230AA0A1W2PPH8 454 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 FIGNL2A6NMB9 653 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 NPIPA2E9PIF3 369 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 NPIPA3F8WFD2 350 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SP6Q3SY56 376 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 C10orf91Q5T1B1 145 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 RAB11FIP2Q7L804 512 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 ZFP82Q8N141 532 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 FADS6Q8N9I5 356 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 FNDC9Q8TBE3 224 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 DYRK2Q92630 601 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 FAAP24Q9BTP7 215 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 CHST5Q9GZS9 411 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 OCIAD1Q9NX40 245 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 ZNF175Q9Y473 711 aa12.2□□□□□ -0.46
GAPVD1-205ENST00000394084 SERPINE3A8MV23 424 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 K7EPK0 472 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 MASP2O00187 686 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 CD80P33681 288 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 EIF1P41567 113 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 MTCP1P56278 107 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 ZNF385CQ66K41 422 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 DHRS7BQ6IAN0 325 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 FAM71E2Q8N5Q1 922 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 HAS2Q92819 552 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 SEC11CQ9BY50 192 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 CNTNAP3Q9BZ76 1288 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 DNAJB11Q9UBS4 358 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 FBXL17Q9UF56 701 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 C19orf25Q9UFG5 118 aaPredicted RBP12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 V9GYS6 101 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 FAM221AA4D161 298 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 MSTNO14793 375 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 FCGR2CP31995 323 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 PPP1R3BQ86XI6 285 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 SGPP2Q8IWX5 399 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 RHBDD1Q8TEB9 315 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 DNASE2BQ8WZ79 361 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 CHRDQ9H2X0 955 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 RCC2Q9P258 522 aaKnown RBP12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 GHRLQ9UBU3 117 aa12.19□□□□□ -0.46
GAPVD1-205ENST00000394084 RNASEK-C17orf49H0YIS7 233 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 TP53I11O14683 189 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 DHHO43323 396 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 MTRF1O75570 445 aaKnown RBP12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 CAV2P51636 162 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 PDZK1IP1Q13113 114 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 GGNBP1Q5YKI7 109 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 NABP1Q96AH0 204 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 SMIM8Q96KF7 97 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 LIME1Q9H400 295 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 CACNA1EQ15878 2313 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 NUDT19A8MXV4 375 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 C9JQL5 133 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 TNRC18O15417 2968 aaPredicted RBP12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 DKK1O94907 266 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 IGLV3-1P01715 115 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 CCL3P10147 92 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 FXYD4P59646 89 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 TSPO2Q5TGU0 170 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 ETV3LQ6ZN32 361 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 Q6ZRG5 221 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 PP6455Q8WZ26 134 aa12.18□□□□□ -0.46
GAPVD1-205ENST00000394084 FBXO17Q96EF6 278 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms