RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 SNRPNP63162 240 aaKnown RBP15.89■□□□□ 0.13
CLSTN1-202ENST00000377298 FAM74A1Q5RGS3 127 aa15.89■□□□□ 0.13
CLSTN1-202ENST00000377298 TUSC5Q8IXB3 177 aa15.89■□□□□ 0.13
CLSTN1-202ENST00000377298 C2orf50Q96LR7 162 aa15.89■□□□□ 0.13
CLSTN1-202ENST00000377298 DDA1Q9BW61 102 aa15.89■□□□□ 0.13
CLSTN1-202ENST00000377298 FLVCR2Q9UPI3 526 aa15.89■□□□□ 0.13
CLSTN1-202ENST00000377298 HFEQ30201 348 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 NAA40Q86UY6 237 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 GREB1LQ9C091 1923 aaPredicted RBP15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 OR5H14A6NHG9 310 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 RND1Q92730 232 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 CMBLQ96DG6 245 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 BTF3L4Q96K17 158 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 RNF150Q9ULK6 438 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 HYAL3O43820 417 aaPredicted RBP15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 NGFP01138 241 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 SP1P08047 785 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 NGFRP08138 427 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 CST2P09228 141 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 SFTPCP11686 197 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 FGF5P12034 268 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 HIST1H1DP16402 221 aaKnown RBP15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 SLC16A12Q6ZSM3 486 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 PRR7Q8TB68 274 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 TPRP12270 2363 aaKnown RBP15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 OR6S1Q8NH40 331 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 APH1BQ8WW43 257 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 SUCNR1Q9BXA5 334 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 TAAR3PQ9P1P4 343 aa15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 STRAPQ9Y3F4 350 aaKnown RBP15.88■□□□□ 0.13
CLSTN1-202ENST00000377298 RGPD3A6NKT7 1758 aaPredicted RBP15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 FTH1P19P0C7X4 201 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 PATE4P0C8F1 98 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 SP9P0CG40 484 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 TESK1Q15569 626 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 SSX1Q16384 188 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 BHLHA15Q7RTS1 189 aaPredicted RBP15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 YIPF5Q969M3 257 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 TNFAIP6P98066 277 aaPredicted RBP15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 ETFDHQ16134 617 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 TMEM128Q5BJH2 165 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 TRAT1Q6PIZ9 186 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 LYPD8Q6UX82 237 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 THNSL2Q86YJ6 484 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 PLSCR3Q9NRY6 295 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 BGLAPP02818 100 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 MDH2P40926 338 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 GUCA2AQ02747 115 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 ST8SIA4Q92187 359 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 MRM2Q9UI43 246 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 ZIC2O95409 532 aaPredicted RBP15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 IL34Q6ZMJ4 242 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 SFT2D1Q8WV19 159 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 FGF11Q92914 225 aa15.87■□□□□ 0.13
CLSTN1-202ENST00000377298 TMEM272A0A1B0GTI8 110 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 H3BMH7 237 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 CLN5O75503 358 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 PURGQ9UJV8 347 aaKnown RBP15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 DTX4Q9Y2E6 619 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 SSSCA1O60232 199 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 CD3EP07766 207 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 MPGP29372 298 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 CCDC71Q8IV32 467 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 C17orf78Q8N4C9 275 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 OR4S1Q8NGB4 309 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 CLDN23Q96B33 292 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 NIPSNAP3BQ9BS92 247 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 A0A1B0GTH9 108 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 AKR7A2O43488 359 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 ELLP55199 621 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 SLC39A7Q92504 469 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 TCEAL7Q9BRU2 100 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 ZBTB25P24278 435 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 RPL12P30050 165 aaKnown RBP15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 KCNJ3P48549 501 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 ARHGAP5-AS1Q96IT6 56 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 WDFY2Q96P53 400 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 CXXC4Q9H2H0 198 aa15.86■□□□□ 0.13
CLSTN1-202ENST00000377298 H2AFB1P0C5Y9 115 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 SELENOPP49908 381 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 GZMMP51124 257 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 SLC25A30Q5SVS4 291 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 MARC2Q969Z3 335 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 M0QZ24 198 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 PDCD6O75340 191 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 ACSM4P0C7M7 580 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 DMKNQ6E0U4 476 aaPredicted RBP15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 NHLRC1Q6VVB1 395 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 KCNRGQ8N5I3 272 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 C10orf35Q96D05 121 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 NARFLQ9H6Q4 476 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 FZR1Q9UM11 496 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 GPR37O15354 613 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 UBE2MP61081 183 aaKnown RBP15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 LINC00303Q3SY05 128 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 C10orf111Q8N326 155 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 OR8B12Q8NGG6 310 aa15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 SCARF2Q96GP6 870 aaPredicted RBP15.85■□□□□ 0.13
CLSTN1-202ENST00000377298 PPIHO43447 177 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms