RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 H0YIG0 161 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 IL5P05113 134 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 CSF2RBP32927 897 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 MUC15Q8N387 334 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 SPRY1O43609 319 aaPredicted RBP11.23□□□□□ -0.61
HCFC1-202ENST00000369984 SSX1Q16384 188 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 MOB3BQ86TA1 216 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 DUS3LQ96G46 650 aaKnown RBP11.23□□□□□ -0.61
HCFC1-202ENST00000369984 ZNF407Q9C0G0 2248 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 SHBQ15464 509 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 RPEL1Q2QD12 228 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 TMEM174Q8WUU8 243 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 TTC9Q92623 222 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 PELI1Q96FA3 418 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 IL2RAP01589 272 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 EMP1P54849 157 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 SNRPEP62304 92 aaKnown RBP11.23□□□□□ -0.61
HCFC1-202ENST00000369984 TRILQ7L0X0 811 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 MZB1Q8WU39 189 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 IGLV3-10A0A075B6K4 115 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 ZBTB25P24278 435 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 ADPRHL1Q8NDY3 354 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 KLHDC9Q8NEP7 349 aa11.23□□□□□ -0.61
HCFC1-202ENST00000369984 ABCD3P28288 659 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 FUT6P51993 359 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 PRSS3P2Q8NHM4 247 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 LPAR5Q9H1C0 372 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 BCORQ6W2J9 1755 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 ONECUT2O95948 504 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 OR2G2Q8NGZ5 317 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SLC25A37Q9NYZ2 338 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 ZNF141Q15928 474 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SPATA46Q5T0L3 261 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 IDSB3KWA1 339 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 ZNF195O14628 629 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 LYZL6O75951 148 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 FAM3AP98173 230 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 PRDX4Q13162 271 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 OR4A47Q6IF82 309 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 MED29Q9NX70 200 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 GPANK1O95872 356 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 CRYAAP02489 173 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 B4GALT1P15291 398 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 RAB32Q13637 225 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 Q56UQ5 140 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 MORN4Q8NDC4 146 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 RSRP1Q9BUV0 290 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 NARFLQ9H6Q4 476 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SLC22A13Q9Y226 551 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 WASHC3Q9Y3C0 194 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 KLKB1P03952 638 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
HCFC1-202ENST00000369984 INSM1Q01101 510 aaPredicted RBP11.22□□□□□ -0.61
HCFC1-202ENST00000369984 PYCR3Q53H96 274 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 LRRC10Q5BKY1 277 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 DMRTC1Q5HYR2 192 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 OTPQ5XKR4 325 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 COL11A1P12107 1806 aaPredicted RBP11.22□□□□□ -0.61
HCFC1-202ENST00000369984 MS4A18H0YCH9 400 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 SOX15O60248 233 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 BMP5P22003 454 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 CDAP32320 146 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 GUCA2AQ02747 115 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 MS4A18Q3C1V0 323 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
HCFC1-202ENST00000369984 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
HCFC1-202ENST00000369984 F5P12259 2224 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 ANKRD34CP0C6C1 535 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.61
HCFC1-202ENST00000369984 LINC00303Q3SY05 128 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 TGIF2LXQ8IUE1 241 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 C16orf52Q8NHV5 167 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 MRAP2Q96G30 205 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 ICAM5Q9UMF0 924 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 DNASE2O00115 360 aaPredicted RBP11.21□□□□□ -0.61
HCFC1-202ENST00000369984 MBTPS2O43462 519 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 KRASP01116 189 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 F11P03951 625 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 CD27P26842 260 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 KLRB1Q12918 225 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 TMEM179BQ7Z7N9 219 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 FOXJ3Q9UPW0 622 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 SLC22A20A6NK97 555 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 H0Y8X5 98 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 ELFN2Q5R3F8 820 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 SLC16A13Q7RTY0 426 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 OR1L3Q8NH93 324 aa11.21□□□□□ -0.61
HCFC1-202ENST00000369984 FBXO4Q9UKT5 387 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms