RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CLN3Q13286 438 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TIGITQ495A1 244 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF385BQ569K4 471 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 OR52E1Q8NGJ3 308 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 HSD17B8Q92506 261 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 FOXJ1Q92949 421 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 SDF2Q99470 211 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 CARHSP1Q9Y2V2 147 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TMED7Q9Y3B3 224 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 A0A1W2PPE2 198 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 PRSS37A4D1T9 235 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ANKRD30BLA7E2S9 258 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 K7EQM0 130 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 PDE6DO43924 150 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TIMP2P16035 220 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 RAE1P78406 368 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 FZD2Q14332 565 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 NXF5Q9H1B4 397 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 UQCR10Q9UDW1 63 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TRAV34A0A0B4J273 112 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 PITX3O75364 302 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 GAMTQ14353 236 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 C2orf27AQ580R0 203 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 IL22RA2Q969J5 263 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 SDHCQ99643 169 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 IGFLR1Q9H665 355 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 CSPG4Q6UVK1 2322 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 DOK2O60496 412 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 UTS2O95399 124 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 AMTP48728 403 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 MMP16P51512 607 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ATP6V1FQ16864 119 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 LYRM7Q5U5X0 104 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 RPL7L1Q6DKI1 246 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 HTR3DQ70Z44 454 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 LINC00346Q8IVM7 164 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 OR4B1Q8NGF8 309 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 FAM216AQ8WUB2 273 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 NAT8BQ9UHF3 227 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 MYO18BQ8IUG5 2567 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TRBV5-4A0A0C4DH59 114 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM202A6NGA9 273 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 FFAR1O14842 300 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ZIC2O95409 532 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 NRASP01111 189 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 KRASP01116 189 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 BSGP35613 385 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 BCL6P41182 706 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 STARD6P59095 220 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ETFBKMTQ8IXQ9 262 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 OR11H4Q8NGC9 324 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 OR10P1Q8NGE3 313 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 SHDQ96IW2 340 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 Q96M85 177 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 A0A0A6YYC8 382 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 B4E171 279 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 I3L1I5 382 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 DBHP09172 617 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 OR5H8P0DN80 308 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 NUBP1P53384 320 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 C11orf42Q8N5U0 333 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 RAB40CQ96S21 281 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 HINT2Q9BX68 163 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 MRPL37Q9BZE1 423 aaKnown RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 ZMIZ1Q9ULJ6 1067 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 TEX50A0A1B0GTY4 177 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 DDNO94850 711 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 SFT2D2O95562 160 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 FLT3LGP49771 235 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 PLAC9Q5JTB6 97 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 ABHD17CQ6PCB6 329 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 STARD4Q96DR4 205 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 RAB33BQ9H082 229 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 SDCBPO00560 298 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 PEX12O00623 359 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 NDUFB7P17568 137 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 APLNRP35414 380 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 ACAA2P42765 397 aaKnown RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 JMJD6Q6NYC1 403 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 MCHR2Q969V1 340 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 A0A0A6YYD5 115 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 A0A0B4J293 547 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 HOXA6P31267 233 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 P2RY1P47900 373 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 UBE2G2P60604 165 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM183AQ8IXX5 376 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 CYB561D1Q8N8Q1 229 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 OTOSQ8NHW6 89 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 ATG101Q9BSB4 218 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 PARD6GQ9BYG4 376 aaPredicted RBP6.34□□□□□ -1.39
SMC1A-201ENST00000322213 SIGLEC7Q9Y286 467 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 NPIPB9F8W1W9 429 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 PI3P19957 117 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 HLA-BQ31612 363 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 SPNS3Q6ZMD2 512 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 MORN4Q8NDC4 146 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 OR1P1Q8NH06 330 aa6.34□□□□□ -1.39
SMC1A-201ENST00000322213 NUDT22Q9BRQ3 303 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms