RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ZNF596Q8TC21 504 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 FOXB1Q99853 325 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 SIGLEC7Q9Y286 467 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 PTBP3O95758 552 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 GLDNQ6ZMI3 551 aaPredicted RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 TP53I13Q8NBR0 393 aaPredicted RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 ZBTB25P24278 435 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 RAB32Q13637 225 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 FAM24BQ8N5W8 94 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 MCHR2Q969V1 340 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 ANKUB1A6NFN9 424 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 FAM157AC9JC47 383 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 AGFG2O95081 481 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 KISS1Q15726 138 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 LHX8Q68G74 356 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 RNASEKQ6P5S7 137 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 C10orf111Q8N326 155 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 OR2V1Q8NHB1 315 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 OR5V1Q9UGF6 321 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 SELEP16581 610 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 CHRNA7P36544 502 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 RGS7BPQ6MZT1 257 aaPredicted RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 PELI1Q96FA3 418 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 HES7Q9BYE0 225 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 BCL2L10Q9HD36 194 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 MMP7P09237 267 aaPredicted RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 COX7A1P24310 79 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 SPEM2Q0P670 501 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 PRICKLE4Q2TBC4 344 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 S100A7AQ86SG5 101 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 MRGPRX4Q96LA9 322 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 ZMIZ1Q9ULJ6 1067 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 TRAPPC1Q9Y5R8 145 aa12.16□□□□□ -0.46
TGFBR3-201ENST00000212355 ADAP1O75689 374 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 TMPRSS11FQ6ZWK6 438 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 SFTPA2Q8IWL1 248 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 OR10D4PQ8NGN7 298 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 CCL17Q92583 94 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 UQCC2Q9BRT2 126 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 UCK1Q9HA47 277 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 PARD6AQ9NPB6 346 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 CDK5Q00535 292 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 HYAL1Q12794 435 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 Q3ZCU0 254 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 SYS1Q8N2H4 156 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 TMEM229BQ8NBD8 167 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 MOB3AQ96BX8 217 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 TAAR5O14804 337 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 KLK10O43240 276 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 IGF2P01344 180 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 OR5AC1P0C628 307 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 PTBP1P26599 531 aaKnown RBP eCLIP12.15□□□□□ -0.468e-7■■■■□ 23.2
TGFBR3-201ENST00000212355 SLC38A6Q8IZM9 456 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 SMIM4Q8WVI0 70 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 KISS1RQ969F8 398 aaPredicted RBP12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 KCNE1BA0A087WTH5 132 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF785A8K8V0 405 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 OPRK1P41145 380 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 GZMKP49863 264 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 OR2W3Q7Z3T1 314 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 ST8SIA1Q92185 356 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 MOB1AQ9H8S9 216 aa12.15□□□□□ -0.46
TGFBR3-201ENST00000212355 A0A0B4J2E0 115 aa12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 A0A1B0GX12 115 aa12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 PNLIPRP2P54317 469 aa12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 CDC20Q12834 499 aa12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 OR2A2Q6IF42 318 aa12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 POMT1Q9Y6A1 747 aa12.15□□□□□ -0.47
TGFBR3-201ENST00000212355 ETFRF1Q6IPR1 90 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 ADGRG3Q86Y34 549 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 OR4D9Q8NGE8 314 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 NPTNQ9Y639 398 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 ARG1P05089 322 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 Q56UQ5 140 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 GFRALQ6UXV0 394 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 NT5CQ8TCD5 201 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms