RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ENTPD1P49961 510 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 RPS6KA3P51812 740 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 CAPZA1P52907 286 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 DLX6P56179 175 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 SLC34A1Q06495 639 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 FAM76BQ5HYJ3 339 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 ZNF770Q6IQ21 691 aaPredicted RBP8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 NANOGP8Q6NSW7 305 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 OR2W3Q7Z3T1 314 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 CPLX4Q7Z7G2 160 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 OR11H6Q8NGC7 330 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 DUX3Q96PT4 197 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 NSRP1Q9H0G5 558 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 FN3KQ9H479 309 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 YY1AP1Q9H869 796 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 RPRD1BQ9NQG5 326 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 VNN3Q9NY84 501 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 HILPDAQ9Y5L2 63 aa8.28□□□□□ -1.08
CTDNEP1-202ENST00000570380 hCG_38984A0A1B0GV85 526 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 OR6C68A6NDL8 312 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 TMEM210A6NLX4 147 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 C17orf98A8MV24 154 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 ANGPT2O15123 496 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 TBX1O43435 398 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 RENP00797 406 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 IFNA14P01570 189 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 SNRNP70P08621 437 aaKnown RBP8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 ZNF823P16415 610 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 CD24P25063 80 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 KDELR2P33947 212 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 SLC7A2P52569 658 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 OR12D2P58182 307 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 SELENOWP63302 87 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 LRRC23Q53EV4 343 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 C16orf82Q7Z2V1 217 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 ZNF329Q86UD4 541 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 ZDHHC21Q8IVQ6 265 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 OSR2Q8N2R0 312 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 MREGQ8N565 214 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 CD177Q8N6Q3 437 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 OR13D1Q8NGV5 346 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 OR2T27Q8NH04 317 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 OR4K13Q8NH42 304 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 REEP6Q96HR9 211 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 ERMAPQ96PL5 475 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 KCNJ15Q99712 375 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 COPS4Q9BT78 406 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 LIN7BQ9HAP6 207 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 SCOCQ9UIL1 159 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 TMEM5Q9Y2B1 443 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 SMAD5-AS1Q9Y6J3 95 aa8.27□□□□□ -1.09
CTDNEP1-202ENST00000570380 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 PSMB11A5LHX3 300 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 ANXA2P2A6NMY6 339 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 NUDT19A8MXV4 375 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 HIST1H1CP16403 213 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 SLC6A1P30531 599 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 OMPP47874 163 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 GSK3AP49840 483 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 GP2P55259 537 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 RAB25P57735 213 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 DYNC1I2Q13409 638 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 TIGD6Q17RP2 521 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 C9orf66Q5T8R8 295 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 RRM2BQ7LG56 351 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 THAP5Q7Z6K1 395 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 VTCN1Q7Z7D3 282 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 CALHM1Q8IU99 346 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 BCAS4Q8TDM0 211 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 OR5P3Q8WZ94 311 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 RSRC1Q96IZ7 334 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 RNF170Q96K19 258 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 SLC25A33Q9BSK2 321 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 KCNG2Q9UJ96 466 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 ZNF256Q9Y2P7 627 aaPredicted RBP8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 MPC1Q9Y5U8 109 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 RYR1P21817 5038 aa8.26□□□□□ -1.09
CTDNEP1-202ENST00000570380 TVP23AA6NH52 213 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 RFPL4AA6NLU0 287 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 ZNF850A8MQ14 1090 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 RFPL4AL1F8VTS6 287 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 H3BUI4 141 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 MTRF1O75570 445 aaKnown RBP8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 PGA5P0DJD9 388 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 IGHV1-8P0DP01 117 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 PYCR1P32322 319 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 PRDX4Q13162 271 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 SEC23BQ15437 767 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 TAF13Q15543 124 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 C9orf152Q5JTZ5 239 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 MINOS1Q5TGZ0 78 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 LCN8Q6JVE9 175 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 WDR93Q6P2C0 686 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 ERICH5Q6P6B1 374 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 SMARCD3Q6STE5 483 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 LYPD4Q6UWN0 246 aa8.25□□□□□ -1.09
CTDNEP1-202ENST00000570380 KCTD8Q6ZWB6 473 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms