RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SLC36A1Q7Z2H8 476 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 PNLDC1Q8NA58 520 aaKnown RBP16.82■□□□□ 0.28
CLK3-225ENST00000569063 RFKQ969G6 155 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 SEH1LQ96EE3 360 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 HRASLS5Q96KN8 279 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 RAB3IPQ96QF0 476 aaPredicted RBP16.82■□□□□ 0.28
CLK3-225ENST00000569063 CCL13Q99616 98 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 OR51I2Q9H344 312 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 ENPP5Q9UJA9 477 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 OR52A1Q9UKL2 312 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 PIGLQ9Y2B2 252 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 ORC6Q9Y5N6 252 aa16.82■□□□□ 0.28
CLK3-225ENST00000569063 TRAV40A0A0B4J280 105 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 A0A1W2PQL4 384 aaPredicted RBP16.81■□□□□ 0.28
CLK3-225ENST00000569063 ZNF879B4DU55 563 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 ZNF732B4DXR9 585 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 E9PQ18 207 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 EBAG9O00559 213 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 EI24O14681 340 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 KRT8P05787 483 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 FAHP16930 419 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 ALDH3A2P51648 485 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 UBA52P62987 128 aaKnown RBP16.81■□□□□ 0.28
CLK3-225ENST00000569063 ELF3P78545 371 aaPredicted RBP16.81■□□□□ 0.28
CLK3-225ENST00000569063 CEP78Q5JTW2 689 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 ZNF684Q5T5D7 378 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 STUMQ69YW2 141 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 PLEKHG7Q6ZR37 379 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 BTN2A1Q7KYR7 527 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 ZNF48Q96MX3 618 aaPredicted RBP16.81■□□□□ 0.28
CLK3-225ENST00000569063 TBX5Q99593 518 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 DNTTIP1Q9H147 329 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 GTF2A1LQ9UNN4 478 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 V9GYS6 101 aa16.81■□□□□ 0.28
CLK3-225ENST00000569063 IGHV3OR16-10A0A075B7F0 116 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 A0A1B0GTI1 187 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 TMEM89A2RUT3 159 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 OR5B21A6NL26 309 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 SULT1C4O75897 302 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 MMP9P14780 707 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 TGM4P49221 684 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 COMPP49747 757 aaPredicted RBP16.8■□□□□ 0.28
CLK3-225ENST00000569063 BPIFB3P59826 476 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 ACTG1P63261 375 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 SLC25A30Q5SVS4 291 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 TMEM42Q69YG0 159 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 MOB3CQ70IA8 216 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 YIPF7Q8N8F6 280 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 WDR13Q9H1Z4 485 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 IMPAD1Q9NX62 359 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 DNAJB11Q9UBS4 358 aa16.8■□□□□ 0.28
CLK3-225ENST00000569063 A0A1B0GW55 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 METTL15A6NJ78 407 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DHRS7CA6NNS2 312 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 P2RY10O00398 339 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 GPR37O15354 613 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 AKR7A2O43488 359 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 RHBDL1O75783 438 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 TOX4O94842 621 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 APOL3O95236 402 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 NRASP01111 189 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L2P0CJ85 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L3P0CJ86 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L4P0CJ87 422 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L5P0CJ88 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L6P0CJ89 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L7P0CJ90 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 AMY2BP19961 511 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 ATP6V1E1P36543 226 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 MTNR1AP48039 350 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4L9Q6RFH8 374 aaPredicted RBP16.79■□□□□ 0.28
CLK3-225ENST00000569063 FAM216BQ8N7L0 139 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 OR10H4Q8NGA5 316 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 OR5T2Q8NGG2 359 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 OR14K1Q8NGZ2 314 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 ST8SIA4Q92187 359 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 UBE2FQ969M7 185 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 DMRTB1Q96MA1 342 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 WDFY2Q96P53 400 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 PCGF1Q9BSM1 259 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 ZMAT3Q9HA38 289 aaKnown RBP16.79■□□□□ 0.28
CLK3-225ENST00000569063 DUX4Q9UBX2 424 aa16.79■□□□□ 0.28
CLK3-225ENST00000569063 RPUSD1Q9UJJ7 312 aaKnown RBP16.79■□□□□ 0.28
CLK3-225ENST00000569063 DLGAP1O14490 977 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 NDUFB3O43676 98 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 RPP14O95059 124 aaKnown RBP16.78■□□□□ 0.28
CLK3-225ENST00000569063 SFTPBP07988 381 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 CCL1P22362 96 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 PRTN3P24158 256 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 GMFBP60983 142 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 SNRPGP62308 76 aaKnown RBP16.78■□□□□ 0.28
CLK3-225ENST00000569063 DMRTC1Q5HYR2 192 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 CLVS2Q5SYC1 327 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 GPR157Q5UAW9 335 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 METTL11BQ5VVY1 283 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 PLCXD3Q63HM9 321 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 C12orf54Q6X4T0 127 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 ZNF788Q6ZQV5 615 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 CATSPERDQ86XM0 798 aa16.78■□□□□ 0.28
CLK3-225ENST00000569063 CBR4Q8N4T8 237 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms