RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SLC35G6P0C7Q6 338 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 RSPH10BP0C881 870 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 SYT1P21579 422 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 BGNP21810 368 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 HTR1DP28221 377 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 RGS6P49758 472 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 MAP3K7CLP57077 242 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 TPM4P67936 248 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CTAG1AP78358 180 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 MRPS15P82914 257 aaKnown RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ADAMTSL3P82987 1691 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 IFITM3Q01628 133 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 NAB1Q13506 487 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ACTL10Q5JWF8 245 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF684Q5T5D7 378 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ERICH5Q6P6B1 374 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 Q6ZR03 302 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 NTM-AS1Q6ZSK4 140 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 AHSA2Q719I0 299 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 SETD3Q86TU7 594 aaPredicted RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 LINC01551Q86U37 167 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 MDP1Q86V88 176 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ENTHD1Q8IYW4 607 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC7A5P1Q8MH63 180 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ZCCHC24Q8N2G6 241 aaKnown RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 TMEM256Q8N2U0 113 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 C15orf56Q8N910 161 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CDRT4Q8N9R6 151 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 DOCK8Q8NF50 2099 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 OR6K2Q8NGY2 324 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 OR13G1Q8NGZ3 307 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CLHC1Q8NHS4 586 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 LGALS14Q8TCE9 139 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 DCAKDQ8WVC6 231 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 EXOSC8Q96B26 276 aaKnown RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CCDC124Q96CT7 223 aaKnown RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 FAM19A4Q96LR4 140 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 OR4K3Q96R72 315 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 TSNAXQ99598 290 aaKnown RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 CIB1Q99828 191 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 NUDT9Q9BW91 350 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC38A1Q9H2H9 487 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 PLEKHA1Q9HB21 404 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 PARVGQ9HBI0 331 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 SPACA1Q9HBV2 294 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 TMBIM4Q9HC24 238 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 HMG20AQ9NP66 347 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ACOT13Q9NPJ3 140 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 LHX9Q9NQ69 397 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 FBXO6Q9NRD1 293 aaPredicted RBP2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 NECAP2Q9NVZ3 263 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 RMND1Q9NWS8 449 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ATPIF1Q9UII2 106 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 ENPP4Q9Y6X5 453 aa2.04□□□□□ -2.08
SHCBP1-202ENST00000563219 SETD1AO15047 1707 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 ZNF608Q9ULD9 1512 aaPredicted RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 MAP3K19Q56UN5 1328 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 IGLV1-50A0A075B6I6 118 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 IGLV3-16A0A075B6K0 115 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TRAV8-6A0A0B4J262 113 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 IGHV2OR16-5A0A0B4J2B6 119 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 IGHV1OR15-9A0A0B4J2B8 117 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TMEM223A0PJW6 202 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 OR5H1A6NKK0 313 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TRPC5OSA6NMA1 111 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 E7EWF7 191 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 H0YJW9 148 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 SMLR1H3BR10 107 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 M0R1B8 84 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 MANBAO00462 879 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 B4GALT5O43286 388 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 UPK1BO75841 260 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 TNFAIP8O95379 198 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 IGKV1D-16P01601 117 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 HLA-DQB1P01920 261 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 PRB2P02812 416 aaPredicted RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 RPSAP08865 295 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 GIMD1P0DJR0 217 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 MAGP20916 626 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 MSNP26038 577 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 UGT2B10P36537 528 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 ACOT2P49753 483 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 RWDD2BP57060 319 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 BASP1P80723 227 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 DR1Q01658 176 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 LRRC63Q05C16 580 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 PPIDQ08752 370 aaKnown RBP2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 C2orf54Q08AI8 447 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 LAMTOR4Q0VGL1 99 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 PNOCQ13519 176 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 COTL1Q14019 142 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 PMVKQ15126 192 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 GUSBP1Q15486 140 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 VAMP3Q15836 100 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 HHATQ5VTY9 493 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 RESP18Q5W5W9 173 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 STEAP4Q687X5 459 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 C8orf74Q6P047 294 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 COPS6Q7L5N1 327 aa2.03□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC16A13Q7RTY0 426 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms