RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TGIF1Q15583 401 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 ACTBL2Q562R1 376 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 DCAF12L2Q5VW00 463 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 TMEM42Q69YG0 159 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 C17orf107Q6ZR85 190 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 SLC25A42Q86VD7 318 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 ZNF100Q8IYN0 542 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 ZFP62Q8NB50 900 aaPredicted RBP8.54□□□□□ -1.04
SMG1-205ENST00000561947 ASB13Q8WXK3 278 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 CPNE2Q96FN4 548 aaPredicted RBP8.54□□□□□ -1.04
SMG1-205ENST00000561947 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 B3GNT2Q9NY97 397 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
SMG1-205ENST00000561947 hCG_38984A0A1B0GV85 526 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 OR2AT4A6NND4 320 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ZNF587BE7ETH6 402 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ERVH48-1M5A8F1 160 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 SNAPC5O75971 98 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 SLC22A5O76082 557 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ACTL6AO96019 429 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 FTH1P19P0C7X4 201 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 CPT2P23786 658 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 BLVRBP30043 206 aaPredicted RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 MTCP1P56278 107 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 MICBQ29980 383 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 VAX1Q5SQQ9 334 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 C11orf88Q6PI97 169 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 ST8SIA4Q92187 359 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 CYYR1Q96J86 154 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 PECRQ9BY49 303 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ELL3Q9HB65 397 aaPredicted RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 ACKR4Q9NPB9 350 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 LIPGQ9Y5X9 500 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ZNF407Q9C0G0 2248 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 FREM1Q5H8C1 2179 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 LOC100509620A0A075B734 347 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 FAM230AA0A1W2PPH8 454 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 CDRT15L2A8MXV6 281 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 XRCC2O43543 280 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 EDN3P14138 238 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ZBTB25P24278 435 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 PRSS12P56730 875 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 FAM3AP98173 230 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ZNF92Q03936 586 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 GK2Q14410 553 aaPredicted RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 SLC10A1Q14973 349 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 RNPS1Q15287 305 aaKnown RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 C3AR1Q16581 482 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 LHFPL2Q6ZUX7 228 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 CPEB3Q8NE35 698 aaKnown RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 ZNF680Q8NEM1 530 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 FBXW5Q969U6 566 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 ELMOD3Q96FG2 381 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 DPCDQ9BVM2 203 aaPredicted RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 C1QTNF5Q9BXJ0 243 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 PRDM14Q9GZV8 571 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
SMG1-205ENST00000561947 ARHGAP21Q5T5U3 1957 aa8.53□□□□□ -1.04
SMG1-205ENST00000561947 SPAARA0A1B0GVQ0 90 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 ANKRD34BA5PLL1 514 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 SERPINE3A8MV23 424 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 CA11O75493 328 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 MPC2O95563 127 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 NRASP01111 189 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
SMG1-205ENST00000561947 TMEM225BP0DP42 221 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 LIPCP11150 499 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 CXCL2P19875 107 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 C4BPBP20851 252 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 CD34P28906 385 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 RRADP55042 308 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 SOX8P57073 446 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 ARG2P78540 354 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 ARL6IP1Q15041 203 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 OR8B8Q15620 311 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 GRK1Q15835 563 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 C6orf183Q5T699 404 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 C9orf135Q5VTT2 229 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 LYG2Q86SG7 212 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 HOGA1Q86XE5 327 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 SPSB4Q96A44 273 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 Q96M66 194 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 METTL9Q9H1A3 318 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 DNAJC13O75165 2243 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 IGKV1-27A0A075B6S5 117 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 MCRIP1C9JLW8 97 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 IL2RAP01589 272 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 NFYAP23511 347 aaPredicted RBP8.52□□□□□ -1.05
SMG1-205ENST00000561947 RBP2P50120 134 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 OPCMLQ14982 345 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 PPA1Q15181 289 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 ZNF766Q5HY98 468 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 LY6G6FQ5SQ64 297 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
SMG1-205ENST00000561947 ARRDC1Q8N5I2 433 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 OR5H2Q8NGV7 314 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms