RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 OR4Q2P0C623 313 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 CCL2P13500 99 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 MMP11P24347 488 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 DUTP33316 252 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ARRB1P49407 418 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ATXN7L3Q14CW9 347 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 LRRC37A5PQ49AS3 106 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ACSM3Q53FZ2 586 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ENTPD8Q5MY95 495 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ARTNQ5T4W7 220 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 CPTPQ5TA50 214 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TMEM268Q5VZI3 342 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ULK3Q6PHR2 472 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 MRPL52Q86TS9 123 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 GID4Q8IVV7 300 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ADPRHL1Q8NDY3 354 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 OR4E2Q8NGC2 313 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 OR4K15Q8NH41 348 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 RNASEH2CQ8TDP1 164 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 C16orf78Q8WTQ4 265 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 CCDC107Q8WV48 283 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 SECTM1Q8WVN6 248 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 EMG1Q92979 244 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 FAM71F1Q96KD3 344 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TIMP4Q99727 224 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 MACROD1Q9BQ69 325 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 MCRIP2Q9BUT9 160 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 PRRG4Q9BZD6 226 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 PLA2G12AQ9BZM1 189 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 C19orf73Q9NVV2 129 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 WDR83OSQ9Y284 106 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 YBX2Q9Y2T7 364 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TRAV26-1A0A087WT03 109 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TEX13DA0A0J9YY54 714 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 B4DGG1 531 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TRDCB7Z8K6 153 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TSPAN2O60636 221 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 CA11O75493 328 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 EPCAMP16422 314 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 GABRR1P24046 479 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 HTR1FP30939 366 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 RBM34P42696 430 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 PGFP49763 221 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 TLE4Q04727 773 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 UBE2V2Q15819 145 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 GGTA1PQ4G0N0 100 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 MARC1Q5VT66 337 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 GGNBP1Q5YKI7 109 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 EIF5AL1Q6IS14 154 aaKnown RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 PLXDC2Q6UX71 529 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 DNM1P46Q6ZS02 220 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 DCXRQ7Z4W1 244 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 JAGN1Q8N5M9 183 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 LINC01356Q8N9X3 169 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 OR9A4Q8NGU2 314 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ARRDC2Q8TBH0 407 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 C15orf40Q8WUR7 153 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 PPP1R1CQ8WVI7 109 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 RND1Q92730 232 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 ADGRG7Q96K78 797 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 HIST1H2BLQ99880 126 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 FAM234AQ9H0X4 552 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 CWH43Q9H720 699 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 CYTL1Q9NRR1 136 aa5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 PRG3Q9Y2Y8 225 aaPredicted RBP5.92□□□□□ -1.46
TSPAN3-209ENST00000560715 KCNE1BA0A087WTH5 132 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 PPIAL4DF5H284 164 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 RNASET2O00584 256 aaKnown RBP5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 CTNSO60931 367 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 OR2J3O76001 311 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 PPP1R3DO95685 299 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 OR2T7P0C7T2 308 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 APLNRP35414 380 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 TTPAP49638 278 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 RPS23P62266 143 aaKnown RBP5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC10A7Q0GE19 358 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 HAGHQ16775 308 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 CHRFAM7AQ494W8 412 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC25A53Q5H9E4 307 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 TNFAIP8L2Q6P589 184 aaPredicted RBP5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 TRIM40Q6P9F5 258 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 TRAPPC5Q8IUR0 188 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 LINC00471Q8N535 108 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 ACBD7Q8N6N7 88 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 OR4C16Q8NGL9 310 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 ADAMTS17Q8TE56 1095 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 C2orf15Q8WU43 125 aaKnown RBP5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 ASB17Q8WXJ9 295 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 OR2M4Q96R27 311 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 GPA33Q99795 319 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC35A5Q9BS91 424 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 C20orf24Q9BUV8 137 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 SELENOIQ9C0D9 397 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 CHST6Q9GZX3 395 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 MTIF3Q9H2K0 278 aaKnown RBP5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 MARCH5Q9NX47 278 aa5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 PEF1Q9UBV8 284 aaKnown RBP5.91□□□□□ -1.46
TSPAN3-209ENST00000560715 NUP214P35658 2090 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms