RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 hCG_38984A0A1B0GV85 526 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 SYNGR1O43759 233 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 NHLRC4P0CG21 123 aaPredicted RBP14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 RPL31P62899 125 aaKnown RBP14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 EGFEM1PQ0D2K5 195 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 KHDC1LQ5JSQ8 128 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 LHFPL4Q7Z7J7 247 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 OR52H1Q8NGJ2 320 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 RNF170Q96K19 258 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 HIST1H2AAQ96QV6 131 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 OR10A2Q9H208 303 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 C19orf12Q9NSK7 152 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 USE1Q9NZ43 259 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 LRP12Q9Y561 859 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
TSPAN3-204ENST00000558394 ZNF850A8MQ14 1090 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 C3orf84H3BNL1 204 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 ARG1P05089 322 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 ENTPD1P49961 510 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 SLC25A1P53007 311 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 BLCAPP62952 87 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 LIPEQ05469 1076 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 KLF10Q13118 480 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 PRDX4Q13162 271 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 TMEM95Q3KNT9 176 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 FAM57BQ71RH2 274 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 RNF144BQ7Z419 303 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 TIGD4Q8IY51 512 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 FAM86B1Q8N7N1 296 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 OR4X2Q8NGF9 303 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 OR51L1Q8NGJ5 315 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 MALSU1Q96EH3 234 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 CHID1Q9BWS9 393 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 NDUFAF4Q9P032 175 aa14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 TBL2Q9Y4P3 447 aaKnown RBP14.35□□□□□ -0.11
TSPAN3-204ENST00000558394 IGKV1D-17A0A075B6S4 117 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 ZNF593O00488 134 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 RHBDL1O75783 438 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 PSG2P11465 335 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 FMO3P31513 532 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 IFNGR2P38484 337 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 SMIM11AP58511 58 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 COL10A1Q03692 680 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 SSX2Q16385 188 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 ZNF782Q6ZMW2 699 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 PIGWQ7Z7B1 504 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 OR52L1Q8NGH7 329 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 OR5P3Q8WZ94 311 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 PIGCQ92535 297 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 RGCCQ9H4X1 137 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 INPP5EQ9NRR6 644 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 CMTM6Q9NX76 183 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 DNAJC27Q9NZQ0 273 aa14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 GMPR2Q9P2T1 348 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 ZMAT5Q9UDW3 170 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-204ENST00000558394 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 DIRAS1O95057 198 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 LMO1P25800 156 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 OR12D2P58182 307 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 LYPD4Q6UWN0 246 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 Q6ZS46 218 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 DYNAPQ8N1N2 210 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 OR13D1Q8NGV5 346 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 ZNF671Q8TAW3 534 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 SDSLQ96GA7 329 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 PGAM5Q96HS1 289 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 C1orf21Q9H246 121 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 YY1AP1Q9H869 796 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 BRD7Q9NPI1 651 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 PCDHGB5Q9Y5G0 923 aa14.33□□□□□ -0.12
TSPAN3-204ENST00000558394 SLC1A7O00341 560 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 EDF1O60869 148 aaKnown RBP14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 GADD45GO95257 159 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 PSKH1P11801 424 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 CCL3L1P16619 93 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 ZNF121P58317 390 aaPredicted RBP14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 EIF2B1Q14232 305 aaKnown RBP14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 KLHL12Q53G59 568 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 FAM76BQ5HYJ3 339 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 UNQ9370/PRO34162Q6UXP9 181 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 THAP5Q7Z6K1 395 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 SLC15A3Q8IY34 581 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 ZDHHC23Q8IYP9 409 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 OR4M1Q8NGD0 313 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 OR2T27Q8NH04 317 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 CAPSLQ8WWF8 208 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 MYDGFQ969H8 173 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 CD300AQ9UGN4 299 aa14.32□□□□□ -0.12
TSPAN3-204ENST00000558394 DHRS12A0PJE2 317 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 AZGP1P25311 298 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 GPM6AP51674 278 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 DYNC1I2Q13409 638 aaKnown RBP14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 DOC2BQ14184 412 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 ZNF561Q8N587 486 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 ZNF511Q8NB15 262 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 RCN3Q96D15 328 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 ATP6V1G3Q96LB4 118 aa14.31□□□□□ -0.12
TSPAN3-204ENST00000558394 MCRIP2Q9BUT9 160 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms