RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PRLHRP49683 370 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 TAS2R60P59551 318 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 RPL23P62829 140 aaKnown RBP2.29□□□□□ -2.04
SCFD1-221ENST00000556534 FAM27D1Q5T7N8 215 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 FAHD1Q6P587 224 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 FAM19A1Q7Z5A9 133 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 SLC30A8Q8IWU4 369 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 PRSS58Q8IYP2 241 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 CDRT4Q8N9R6 151 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 RXFP2Q8WXD0 754 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 PTX4Q96A99 478 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 C18orf15Q96N68 181 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 RDH12Q96NR8 316 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 TSNAXQ99598 290 aaKnown RBP2.29□□□□□ -2.04
SCFD1-221ENST00000556534 NAPGQ99747 312 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-221ENST00000556534 TMEM243Q9BU79 118 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 C1orf198Q9H425 327 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 SPACA1Q9HBV2 294 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 WFDC1Q9HC57 220 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 RBFOX1Q9NWB1 397 aaKnown RBP2.29□□□□□ -2.04
SCFD1-221ENST00000556534 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 HYOU1Q9Y4L1 999 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 GMEB1Q9Y692 573 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 S4R3C0 116 aa2.29□□□□□ -2.04
SCFD1-221ENST00000556534 ZNF608Q9ULD9 1512 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-221ENST00000556534 A8MUU9 505 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 SEC14L6B5MCN3 397 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 KRBOX1C9JBD0 128 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 RAD1O60671 282 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 REM1O75628 298 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TTC4O95801 387 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TRBV12-3P01733 135 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 RPN2P04844 631 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 RNASE2P10153 161 aaKnown RBP2.28□□□□□ -2.04
SCFD1-221ENST00000556534 HTR1DP28221 377 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 P2RY2P41231 377 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 SLC35A1P78382 337 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 CRADDP78560 199 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 SMUG1Q53HV7 270 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TCEAL5Q5H9L2 206 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 ACTL10Q5JWF8 245 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TMEM236Q5W0B7 351 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 STEAP4Q687X5 459 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 SELENOHQ8IZQ5 122 aaKnown RBP2.28□□□□□ -2.04
SCFD1-221ENST00000556534 NECAP1Q8NC96 275 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 OR10Z1Q8NGY1 313 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 OR6N1Q8NGY5 312 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TCEAL3Q969E4 200 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 ZNF75AQ96N20 296 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TEAD3Q99594 435 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 BBS2Q9BXC9 721 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 OR52A5Q9H2C5 316 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 VCX3AQ9NNX9 186 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 TMEM100Q9NV29 134 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 BRWD3Q6RI45 1802 aa2.28□□□□□ -2.04
SCFD1-221ENST00000556534 H7C2Y5 167 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 SOCS1O15524 211 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 GATCO43716 136 aaKnown RBP2.27□□□□□ -2.05
SCFD1-221ENST00000556534 NDUFS6O75380 124 aaKnown RBP2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CCNE2O96020 404 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 IGKV1D-16P01601 117 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 OR56A5P0C7T3 313 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 C1GALT1C1LP0DN25 315 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 NQO2P16083 231 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CXCR1P25024 350 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 OR2B6P58173 313 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CYP24A1Q07973 514 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 SNRNP35Q16560 246 aaKnown RBP2.27□□□□□ -2.05
SCFD1-221ENST00000556534 SAXO2Q658L1 398 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 SETD3Q86TU7 594 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CALHM1Q8IU99 346 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CA13Q8N1Q1 262 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 LINC00469Q8N7U9 141 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 C19orf18Q8NEA5 215 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 OR6K2Q8NGY2 324 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 OR10G6Q8NH81 332 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 COQ8AQ8NI60 647 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CAMK2N2Q96S95 79 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 DOK1Q99704 481 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 HSD17B10Q99714 261 aaKnown RBP2.27□□□□□ -2.05
SCFD1-221ENST00000556534 SULT4A1Q9BR01 284 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 OR52D1Q9H346 318 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 GOLPH3Q9H4A6 298 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 PLEKHA1Q9HB21 404 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 DDIT4Q9NX09 232 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 MAT2BQ9NZL9 334 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 VAPAQ9P0L0 249 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 CYB5R1Q9UHQ9 305 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 SIGLEC7Q9Y286 467 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 ACOT9Q9Y305 439 aa2.27□□□□□ -2.05
SCFD1-221ENST00000556534 IGHV1OR15-9A0A0B4J2B8 117 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ERICH2A1L162 156 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 C5orf63A6NC05 138 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF850A8MQ14 1090 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 M0R1B8 84 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 TNFRSF11BO00300 401 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 BPY2O14599 106 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 SERPINB7O75635 380 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 GLSO94925 669 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-221ENST00000556534 YIF1AO95070 293 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms