RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PBDC1Q9BVG4 233 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SUCNR1Q9BXA5 334 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 HIPK2Q9H2X6 1198 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 TCEAL2Q9H3H9 227 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 SAV1Q9H4B6 383 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 C5orf66Q9H5L9 145 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 METTL8Q9H825 291 aaKnown RBP5.7□□□□□ -1.5
SNHG1-225ENST00000545920 TAF9BQ9HBM6 251 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 CENPMQ9NSP4 180 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 LUZP4Q9P127 313 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 HSF4Q9ULV5 492 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 KCNIP3Q9Y2W7 256 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 NSG2Q9Y328 171 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 TIMM10BQ9Y5J6 103 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 LRP4O75096 1905 aa5.7□□□□□ -1.5
SNHG1-225ENST00000545920 IGHV5-51A0A0C4DH38 117 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 WIPF3A6NGB9 483 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 FOXI3A8MTJ6 420 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 H0YIZ8 118 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 K7EPK0 472 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 CCSO14618 274 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ADAM10O14672 748 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 DNPH1O43598 174 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 DUX1O43812 170 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 DEDDO75618 318 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 MPIG6BO95866 241 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 GPANK1O95872 356 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 PMP2P02689 132 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 FCGR3AP08637 254 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 HKR1P10072 659 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 RPS2P15880 293 aaKnown RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 GNB3P16520 340 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ADCYAP1P18509 176 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 SDHBP21912 280 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 PTAFRP25105 342 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 MAS1LP35410 378 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 GUCA1AP43080 201 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 RGS19P49795 217 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF41P51814 821 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 UCP3P55916 312 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 CLRN1P58418 232 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 POU3F1Q03052 451 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ARFRP1Q13795 201 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 IL13RA2Q14627 380 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ATXN7L3Q14CW9 347 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 RSU1Q15404 277 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 OR8B8Q15620 311 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 OR7A5Q15622 319 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 HIST3H3Q16695 136 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 MST1LQ2TV78 715 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 CHRFAM7AQ494W8 412 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 C9orf50Q5SZB4 431 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 C1QL3Q5VWW1 255 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 OR10K2Q6IF99 312 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 FOXL2NBQ6ZUU3 175 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TTLL10Q6ZVT0 673 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 SYT13Q7L8C5 426 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TMPRSS7Q7RTY8 843 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 C1QL4Q86Z23 238 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 FAM185AQ8N0U4 392 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 OR5AS1Q8N127 324 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF610Q8N9Z0 462 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 OR9K2Q8NGE7 335 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 OR13C9Q8NGT0 318 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 LILRB1Q8NHL6 650 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 FNDC9Q8TBE3 224 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 SFT2D1Q8WV19 159 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TMED6Q8WW62 240 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TSLPQ969D9 159 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM230Q96A57 120 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 SPSB1Q96BD6 273 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TECTBQ96PL2 329 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 S100A13Q99584 98 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 C12orf57Q99622 126 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 GAL3ST1Q99999 423 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF251Q9BRH9 671 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 RTBDNQ9BSG5 229 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 VN1R1Q9GZP7 353 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TLNRD1Q9H1K6 362 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 KCNK15Q9H427 330 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 FN3KRPQ9HA64 309 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 LMAN1LQ9HAT1 526 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 ACKR4Q9NPB9 350 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 METTL1Q9UBP6 276 aaKnown RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 POLR1DQ9Y2S0 133 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 RAXQ9Y2V3 346 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 STARD10Q9Y365 291 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 PTRH2Q9Y3E5 179 aaKnown RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM184BQ9Y519 407 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-225ENST00000545920 PCDHGA1Q9Y5H4 931 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 V9GYS6 101 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 X6R8D5 127 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 SCN2AQ99250 2005 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 SCN3AQ9NY46 2000 aa5.69□□□□□ -1.5
SNHG1-225ENST00000545920 C2orf16Q68DN1 1984 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 DUXBA0A1W2PPF3 345 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 A0A1W2PR77 199 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CRYM-AS1A6NIL9 109 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 UMAD1C9J7I0 102 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 UBE2CO00762 179 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms