RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 TMEM14DPA8MWL7 114 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ISG15P05161 165 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 GUSBP08236 651 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 SOD3P08294 240 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 SERPINA2P20848 420 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ZNF93P35789 620 aaPredicted RBP13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 OR3A4PP47883 348 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 CCR5P51681 352 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ARFRP1Q13795 201 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 VAX1Q5SQQ9 334 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 TMEM156Q8N614 296 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 DEFB119Q8N690 84 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 NTNG2Q96CW9 530 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ADOQ96SZ5 270 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 PRRX2Q99811 253 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 EHFQ9NZC4 300 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 CDC14CA4D256 554 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 HCRTR2O43614 444 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 DEDDO75618 318 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 UTS2O95399 124 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 IGLV3-19P01714 112 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 TTRP02766 147 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 DANCRP0C864 163 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 IL11P20809 199 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 HSD11B1P28845 292 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 OR3A2P47893 321 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 RGS19P49795 217 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ASCL1P50553 236 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 ZNF117Q03924 483 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 RSU1Q15404 277 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 Q7L0L9 218 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 OOSP2Q86WS3 158 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 STX12Q86Y82 276 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 HSD17B11Q8NBQ5 300 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 MRPL24Q96A35 216 aaKnown RBP13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 OR11A1Q9GZK7 315 aa13.11□□□□□ -0.31
AC005840.4-201ENST00000541242 XRCC2O43543 280 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 SYT7O43581 403 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 GAPDHP04406 335 aaKnown RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H1BP16401 226 aaKnown RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 ANOS1P23352 680 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 CSNK2A1P68400 391 aaPredicted RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 GLO1Q04760 184 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 C1orf140Q5VVS0 124 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 OPN5Q6U736 354 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 MAMDC2Q7Z304 686 aaPredicted RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 KDF1Q8NAX2 398 aaPredicted RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 CSNK2A3Q8NEV1 391 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 Q8WTZ3 238 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 MUCL1Q96DR8 90 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 OSGIN2Q9Y236 505 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 MEMO1Q9Y316 297 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 SEC16AO15027 2179 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 CEACAM18A8MTB9 384 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 H2BFMP0C1H6 154 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 ZNF823P16415 610 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 KLK2P20151 261 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 SLC35A1P78382 337 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 LHFPL1Q86WI0 220 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 SLC26A10Q8NG04 563 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 SUCNR1Q9BXA5 334 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 TPSD1Q9BZJ3 242 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 ADAM19Q9H013 955 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 NXF5Q9H1B4 397 aaKnown RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
AC005840.4-201ENST00000541242 TGIF2-C20orf24A0A0A6YYL0 155 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 ZNF726A6NNF4 738 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 SLC31A2O15432 143 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BKO60814 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 CLPSP04118 112 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BJP06899 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BOP23527 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BBP33778 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 UCP2P55851 309 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BDP58876 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BCP62807 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST2H2BEQ16778 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 KHDC3LQ587J8 217 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 C19orf47Q8N9M1 422 aaKnown RBP13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BHQ93079 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BNQ99877 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 HIST1H2BMQ99879 126 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 LUZP4Q9P127 313 aa13.09□□□□□ -0.31
AC005840.4-201ENST00000541242 MRPS28Q9Y2Q9 187 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms