RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 SLC1A7O00341 560 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 TXNDC12O95881 172 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 SLC6A6P31641 620 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 SLC15A1P46059 708 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 GZMMP51124 257 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 SLC25A1P53007 311 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 C9orf152Q5JTZ5 239 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 SMARCD3Q6STE5 483 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 SLC16A9Q7RTY1 509 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 DCXRQ7Z4W1 244 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 ZDHHC21Q8IVQ6 265 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 MRPL41Q8IXM3 137 aaKnown RBP7.47□□□□□ -1.21
PTPN12-216ENST00000523952 PROKR2Q8NFJ6 384 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 OR2T27Q8NH04 317 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 NDNFQ8TB73 568 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 FANK1Q8TC84 345 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 TSPEARQ8WU66 669 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 HIST1H2AAQ96QV6 131 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 KCNJ15Q99712 375 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 IFT27Q9BW83 186 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 FN3KQ9H479 309 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 ABCB9Q9NP78 766 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 C19orf12Q9NSK7 152 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 FAM32AQ9Y421 112 aaKnown RBP7.47□□□□□ -1.21
PTPN12-216ENST00000523952 LRP12Q9Y561 859 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 HILPDAQ9Y5L2 63 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 SNX13Q9Y5W8 968 aa7.47□□□□□ -1.21
PTPN12-216ENST00000523952 ZNF878C9JN71 531 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 PTP4A3O75365 173 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 RHBDL1O75783 438 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 LPLP06858 475 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 SPARCP09486 303 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 HIST1H1CP16403 213 aaKnown RBP7.46□□□□□ -1.22
PTPN12-216ENST00000523952 RPS27P42677 84 aaKnown RBP7.46□□□□□ -1.22
PTPN12-216ENST00000523952 CX3CR1P49238 355 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 ARHGDIBP52566 201 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
PTPN12-216ENST00000523952 MAGOHP61326 146 aaKnown RBP7.46□□□□□ -1.22
PTPN12-216ENST00000523952 MXRA7P84157 204 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 FAM3AP98173 230 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 IFI44LQ53G44 452 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 TNFAIP8L3Q5GJ75 292 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 TCTEX1D4Q5JR98 221 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 C16orf82Q7Z2V1 217 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 VTCN1Q7Z7D3 282 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 ZBTB46Q86UZ6 589 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 TIGD4Q8IY51 512 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 DYNAPQ8N1N2 210 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 OR2T12Q8NG77 320 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 OR4M1Q8NGD0 313 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 OR8J3Q8NGG0 315 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 SLAMF6Q96DU3 332 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 RNF170Q96K19 258 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 PRR25Q96S07 402 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 TLNRD1Q9H1K6 362 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 ANKRD19PQ9H560 264 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 YY1AP1Q9H869 796 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 RHBDD3Q9Y3P4 386 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 MPC1Q9Y5U8 109 aa7.46□□□□□ -1.22
PTPN12-216ENST00000523952 EPPK1P58107 5090 aaKnown RBP7.46□□□□□ -1.22
PTPN12-216ENST00000523952 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 IGKV1D-17A0A075B6S4 117 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 TVP23AA6NH52 213 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 FAM90A8PA6NJQ4 464 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 ZNF850A8MQ14 1090 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 FAM220BPB1ANY3 271 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 FFAR1O14842 300 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 GSTA4O15217 222 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 APOC1P02654 83 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 H1F0P07305 194 aaKnown RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PSG2P11465 335 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PIPP12273 146 aaPredicted RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 CCL3L1P16619 93 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 OTX1P32242 354 aaPredicted RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PYCR1P32322 319 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 THBS3P49746 956 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 GRB2P62993 217 aaKnown RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PRDX4Q13162 271 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 IL18R1Q13478 541 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 EIF2B1Q14232 305 aaKnown RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 ABCA11PQ4W5N1 156 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 NKAPLQ5M9Q1 402 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 TMEM200BQ69YZ2 307 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 FAM57BQ71RH2 274 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 THAP5Q7Z6K1 395 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 ZNF671Q8TAW3 534 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 DYDC1Q8WWB3 177 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PIGCQ92535 297 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 STMN2Q93045 179 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 SPSB4Q96A44 273 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PGAM5Q96HS1 289 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 RCHY1Q96PM5 261 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 OR10A2Q9H208 303 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 BRD7Q9NPI1 651 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 MRPL22Q9NWU5 206 aaKnown RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 DNAJC27Q9NZQ0 273 aa7.45□□□□□ -1.22
PTPN12-216ENST00000523952 DYNC2H1Q8NCM8 4307 aaKnown RBP7.45□□□□□ -1.22
PTPN12-216ENST00000523952 PSMB11A5LHX3 300 aa7.44□□□□□ -1.22
PTPN12-216ENST00000523952 OR6C68A6NDL8 312 aa7.44□□□□□ -1.22
PTPN12-216ENST00000523952 SLC22A2O15244 555 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms