RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TVP23BQ9NYZ1 205 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 DNAJC27Q9NZQ0 273 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 EIF3KQ9UBQ5 218 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 LPAR3Q9UBY5 353 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 AASSQ9UDR5 926 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ATPIF1Q9UII2 106 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 COPS3Q9UNS2 423 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 BAIAP2Q9UQB8 552 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 WIPI2Q9Y4P8 454 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 N6AMT1Q9Y5N5 214 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 IQCF6A8MYZ5 107 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ANKRD65E5RJM6 399 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PRR23D1E9PI22 279 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 G3V2T6 193 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 H3BSA7 217 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 LMX1BO60663 402 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 FCN3O75636 299 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 CYB5R3P00387 301 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 IGHV2-70P01814 119 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 IGHV2-5P01817 119 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 LCATP04180 440 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 CD55P08174 381 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PRR23D2P0DMB1 279 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF823P16415 610 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF3P17036 446 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 CA6P23280 308 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ACKR3P25106 362 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 FASP25445 335 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 OPRL1P41146 370 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 GPR6P46095 362 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ARHGDIAP52565 204 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 LINC00205P59089 165 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ELF3P78545 371 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 TNFAIP6P98066 277 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PPP2R2BQ00005 443 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 GK3PQ14409 553 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ZMYND11Q15326 602 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 MPPED2Q15777 294 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 SNAPC1Q16533 368 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PCGF3Q3KNV8 242 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 AWAT1Q58HT5 328 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 TEX30Q5JUR7 227 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 FAM120AOSQ5T036 256 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PRAMEF6Q5VXH4 476 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 SLX4IPQ5VYV7 408 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 C12orf73Q69YU5 71 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 LRRN1Q6UXK5 716 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PLEKHG7Q6ZR37 379 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 SSX6Q7RTT6 188 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 WDR86Q86TI4 376 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 HIPK1Q86Z02 1210 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PARP8Q8N3A8 854 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF283Q8N7M2 679 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 OR6N2Q8NGY6 317 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 OTOSQ8NHW6 89 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 SGK3Q96BR1 496 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 NRBF2Q96F24 287 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ELMOD3Q96FG2 381 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 LYZL4Q96KX0 146 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 FYTTD1Q96QD9 318 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 IL4I1Q96RQ9 567 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 INTS14Q96SY0 518 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 TEAD3Q99594 435 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC29A1Q99808 456 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC30A2Q9BRI3 323 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 COPS4Q9BT78 406 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 OSBPL10Q9BXB5 764 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 FGF23Q9GZV9 251 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 GABARAPL1Q9H0R8 117 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 MMADHCQ9H3L0 296 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF665Q9H7R5 613 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 MYOZ1Q9NP98 299 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PAPOLBQ9NRJ5 636 aaKnown RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 KRT84Q9NSB2 600 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 DECR2Q9NUI1 292 aa4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.01□□□□□ -1.77
EXOSC3-204ENST00000465860 PLSCR5A0PG75 271 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 CD300LBA8K4G0 201 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF878C9JN71 531 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM178BH3BS89 294 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 PLPP2O43688 288 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 TLX2O43763 284 aaPredicted RBP4□□□□□ -1.77
EXOSC3-204ENST00000465860 SRSF10O75494 262 aaKnown RBP4□□□□□ -1.77
EXOSC3-204ENST00000465860 CIB2O75838 187 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 TUSC2O75896 110 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 PNPP00491 289 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 IFNGP01579 166 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 TFF1P04155 84 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 ALPLP05186 524 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 ERCC1P07992 297 aaPredicted RBP4□□□□□ -1.77
EXOSC3-204ENST00000465860 ALOX5APP20292 161 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 CX3CR1P49238 355 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 RGS6P49758 472 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 RAD23AP54725 363 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 CDH15P55291 814 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 TMEM33P57088 247 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF121P58317 390 aaPredicted RBP4□□□□□ -1.77
EXOSC3-204ENST00000465860 SELENOVP59797 346 aa4□□□□□ -1.77
EXOSC3-204ENST00000465860 SUMO2P61956 95 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms