RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 UNKLQ9H9P5 680 aaKnown RBP12.1□□□□□ -0.47
PTPRE-204ENST00000455661 TSPAN2O60636 221 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 FKTNO75072 461 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 KLK3P07288 261 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 CTSDP07339 412 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ACY1Q03154 408 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 H1FNTQ75WM6 255 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 SEMA6DQ8NFY4 1073 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 DAZLQ92904 295 aaKnown RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ZDHHC12Q96GR4 267 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF2Q9BSG1 426 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 POLR1DQ9Y2S0 133 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 TMEM184BQ9Y519 407 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 CRYM-AS1A6NIL9 109 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 FTCDNL1E5RQL4 147 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 COL9A1P20849 921 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 BLVRBP30043 206 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 AFF3P51826 1226 aaKnown RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 HSF1Q00613 529 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF674Q2M3X9 581 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 RTL6Q6ICC9 239 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 OR2AJ1Q8NGZ0 328 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF721Q8TF20 911 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 TMEM234Q8WY98 164 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 FAM71F1Q96KD3 344 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 C5orf34Q96MH7 638 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 GABRG3Q99928 467 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 PECRQ9BY49 303 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 TCEAL2Q9H3H9 227 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
PTPRE-204ENST00000455661 MED29Q9NX70 200 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 DOK5Q9P104 306 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 TMED3Q9Y3Q3 217 aa12.09□□□□□ -0.47
PTPRE-204ENST00000455661 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 H0YIG0 161 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 MASP2O00187 686 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 LY86O95711 162 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 MBPP02686 304 aaPredicted RBP12.08□□□□□ -0.48
PTPRE-204ENST00000455661 Q3ZCU0 254 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 TTLL10Q6ZVT0 673 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 LRRC18Q8N456 261 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 OR10S1Q8NGN2 331 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 SGK3Q96BR1 496 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 MUCL1Q96DR8 90 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 TGM7Q96PF1 710 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 C8orf33Q9H7E9 229 aaPredicted RBP12.08□□□□□ -0.48
PTPRE-204ENST00000455661 BCO1Q9HAY6 547 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 WFDC1Q9HC57 220 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 GPR84Q9NQS5 396 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 MMACHCQ9Y4U1 282 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 NPIPB13A6NJU9 1138 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 NPIPB4C9JG80 1138 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 H7C1Q1 480 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 C1QL1O75973 258 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 IGKV3-11P04433 115 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.48
PTPRE-204ENST00000455661 SERPINA2P20848 420 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 TLE3Q04726 772 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 PPA1Q15181 289 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 TMEM156Q8N614 296 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
PTPRE-204ENST00000455661 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
PTPRE-204ENST00000455661 PADI1Q9ULC6 663 aa12.08□□□□□ -0.48
PTPRE-204ENST00000455661 ATXN7L1Q9ULK2 861 aaPredicted RBP12.08□□□□□ -0.48
PTPRE-204ENST00000455661 A0A1B0GV50 99 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 A0A1W2PQF6 199 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 IFITM10A6NMD0 228 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 GPR37O15354 613 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 DDAH2O95865 285 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 HPNP05981 417 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF542PQ5EBM4 170 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 PLXDC2Q6UX71 529 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 DBX2Q6ZNG2 339 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 SSX9Q7RTT3 188 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 HSD17B11Q8NBQ5 300 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 OR8B12Q8NGG6 310 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 S100PBPQ96BU1 408 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 CAPNS2Q96L46 248 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 SH3BGRL3Q9H299 93 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 LANCL2Q9NS86 450 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 MMP24Q9Y5R2 645 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 CACNA1IQ9P0X4 2223 aa12.07□□□□□ -0.48
PTPRE-204ENST00000455661 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 F10P00742 488 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 SLC2A1P11166 492 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 CTSEP14091 401 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 LMO1P25800 156 aa12.06□□□□□ -0.48
PTPRE-204ENST00000455661 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
PTPRE-204ENST00000455661 RBP2P50120 134 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms