RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SVOPLQ8N434 492 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 EIF4E3Q8N5X7 224 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM86BQ8N661 226 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF557Q8N988 423 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR2M7Q8NG81 312 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR6T1Q8NGN1 323 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR4X1Q8NH49 305 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 CD200R1Q8TD46 325 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ABHD3Q8WU67 409 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TNFAIP8L1Q8WVP5 186 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 FGF11Q92914 225 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 UCN3Q969E3 161 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 EXOSC8Q96B26 276 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 PPCDCQ96CD2 204 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 HAUS1Q96CS2 278 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 RCN3Q96D15 328 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 WBP1Q96G27 269 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 MRPL48Q96GC5 212 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SEC22AQ96IW7 307 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 PPP1R2P1Q96PQ5 205 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ALKBH3Q96Q83 286 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TBX5Q99593 518 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 C12orf57Q99622 126 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 GPR21Q99679 349 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ARHGDIGQ99819 225 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM204Q9BSN7 226 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR11A1Q9GZK7 315 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ARV1Q9H2C2 271 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR51J1Q9H342 316 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 EHFQ9NZC4 300 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR1A1Q9P1Q5 309 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 IL36RNQ9UBH0 155 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 MMP17Q9ULZ9 603 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TP53TG5Q9Y2B4 290 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 PPP2R2CQ9Y2T4 447 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 SIGLEC9Q9Y336 463 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 MRPS18CQ9Y3D5 142 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 BAZ1BQ9UIG0 1483 aaKnown RBP2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 ABCC8Q09428 1581 aa2.95□□□□□ -1.94
HMGB1P12-201ENST00000438594 TAF1LQ8IZX4 1826 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 IGLV9-49A0A0B4J1Y8 123 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 IGHV2OR16-5A0A0B4J2B6 119 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 A0A0G2JMP0 313 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 FAM240AA0A1B0GVK7 77 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 A0A1W2PPI3 338 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 IGSF23A1L1A6 192 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF814B7Z6K7 855 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SULT2B1O00204 365 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 TNFRSF11BO00300 401 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 PHYHO14832 338 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 TYROBPO43914 113 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 MT-CO2P00403 227 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 IGKV3-20P01619 116 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 KLK3P07288 261 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 CRYGDP07320 174 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 GIPP09681 153 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ESDP10768 282 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 RPL35AP18077 110 aaKnown RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 BCL3P20749 454 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRKACGP22612 351 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC2A5P22732 501 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 OMGP23515 440 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 S100GP29377 79 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ERP29P30040 261 aaKnown RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 CCR7P32248 378 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 GPR183P32249 361 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 NUDT1P36639 197 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 OPRL1P41146 370 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SOX3P41225 446 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR3A4PP47883 348 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR1D4P47884 311 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 GCLMP48507 274 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 MEOX2P50222 304 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 RPS27AP62979 156 aaKnown RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 RPL24P83731 157 aaKnown RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 GPR18Q14330 331 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 PRSS8Q16651 343 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 IZUMO4Q1ZYL8 232 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 HIST2H3PS2Q5TEC6 136 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF57Q68EA5 555 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 FBXL22Q6P050 247 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 TMEM150AQ86TG1 271 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SKA3Q8IX90 412 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 PNKDQ8N490 385 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 KBTBD8Q8NFY9 601 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR4M2Q8NGB6 313 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 OR52E4Q8NGH9 312 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ZNF564Q8TBZ8 553 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SPPL2BQ8TCT7 592 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ASB13Q8WXK3 278 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SLC25A38Q96DW6 304 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 SCMH1Q96GD3 660 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 PGLYRP3Q96LB9 341 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 FAM218AQ96MZ4 157 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 MCHR1Q99705 422 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 KCTD14Q9BQ13 255 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 COA1Q9GZY4 146 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 ABCG5Q9H222 651 aa2.94□□□□□ -1.94
HMGB1P12-201ENST00000438594 DCSTAMPQ9H295 470 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms