RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CLEC12AQ5QGZ9 265 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF774Q6NX45 483 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 FBXW12Q6X9E4 464 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 GLB1L2Q8IW92 636 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 BPIFB2Q8N4F0 458 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF610Q8N9Z0 462 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR56A1Q8NGH5 318 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR1J1Q8NGS3 322 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 BRIX1Q8TDN6 353 aaKnown RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ITLN2Q8WWU7 325 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 NEURL3Q96EH8 262 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TIMP4Q99727 224 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 POLR2J3Q9H1A7 115 aaKnown RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR10A4Q9H209 315 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF703Q9H7S9 590 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 PARP11Q9NR21 331 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TAS2R10Q9NYW0 307 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ZFP30Q9Y2G7 519 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 WDR45Q9Y484 360 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BKO60814 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 PMP2P02689 132 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BJP06899 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 MAOAP21397 527 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 DRD5P21918 477 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BOP23527 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 CEACAM8P31997 349 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BBP33778 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 PTTG1IPP53801 180 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BDP58876 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BCP62807 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 EXOSC7Q15024 291 aaKnown RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST2H2BEQ16778 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ZSWIM7Q19AV6 140 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 MOGAT2Q3SYC2 334 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ENTPD8Q5MY95 495 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR2G6Q5TZ20 316 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 GTPBP8Q8N3Z3 284 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 LINC00471Q8N535 108 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR51G2Q8NGK0 314 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BHQ93079 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BNQ99877 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BMQ99879 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ATG101Q9BSB4 218 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SMDT1Q9H4I9 107 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR14J1Q9UGF5 321 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM238C9JI98 176 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HMGN4O00479 90 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 CTXN2P0C2S0 81 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TPT1P13693 172 aaKnown RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TBPP20226 339 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HNF1AP20823 631 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 FBLP22087 321 aaKnown RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 CFPP27918 469 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SSBP1Q04837 148 aaKnown RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SCGB2B2Q4G0G5 96 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 AWAT1Q58HT5 328 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 ARSJQ5FYB0 599 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR8G2PQ6IF36 304 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SLC16A11Q8NCK7 471 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR2M7Q8NG81 312 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR2D3Q8NGH3 330 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HIST1H2BLQ99880 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SUCNR1Q9BXA5 334 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 SLC25A31Q9H0C2 315 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 PRO1933Q9H354 126 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TVP23BQ9NYZ1 205 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 OR52A1Q9UKL2 312 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 CR1P17927 2039 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 HEATR5AQ86XA9 2040 aa6.04□□□□□ -1.44
CSDE1-204ENST00000369530 TEX15Q9BXT5 2789 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 MED12LQ86YW9 2145 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 hCG_1809904A0A1W2PP81 198 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 A0A1W2PR64 198 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 A0A1W2PRV1 198 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 AHSA1O95433 338 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 CH25HO95992 272 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 TOMM40O96008 361 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 PDLIM4P50479 330 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 KLF3P57682 345 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 HSF1Q00613 529 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 C1orf194Q5T5A4 169 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM268Q5VZI3 342 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 AWAT2Q6E213 333 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF322Q6U7Q0 402 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 BTNL3Q6UXE8 466 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 LSRQ86X29 649 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 MUC20Q8N307 709 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 OR5AK2Q8NH90 309 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 RASL10BQ96S79 203 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 PARD6GQ9BYG4 376 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 AURKAIP1Q9NWT8 199 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 MYOTQ9UBF9 498 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 IL20RAQ9UHF4 553 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 ERRFI1Q9UJM3 462 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-204ENST00000369530 A4GNTQ9UNA3 340 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 RCE1Q9Y256 329 aa6.03□□□□□ -1.44
CSDE1-204ENST00000369530 MRPS33Q9Y291 106 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms