RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 B3GALT5Q9Y2C3 310 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 LSM5Q9Y4Y9 91 aaKnown RBP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 TMEM184BQ9Y519 407 aaPredicted RBP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 MMP24Q9Y5R2 645 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 WISP1O95388 367 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 IL33O95760 270 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 LMO1P25800 156 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF117Q03924 483 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF124Q15973 351 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 GLIPR1L1Q6UWM5 242 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 SLC26A10Q8NG04 563 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 OR10D4PQ8NGN7 298 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 FNDC9Q8TBE3 224 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 BSCL2Q96G97 398 aaPredicted RBP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 SPACA5Q96QH8 159 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 HRASLS2Q9NWW9 162 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 FAM206AQ9NX38 181 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 TUBD1Q9UJT1 453 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 PUS1Q9Y606 427 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 CEP192Q8TEP8 1941 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 A8MVM7 634 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 B4DGG1 531 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 H7C1Q1 480 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 BCAT2O15382 392 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 SYT7O43581 403 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 C1QL1O75973 258 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 MT-ATP6P00846 226 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 TTRP02766 147 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 H2BFMP0C1H6 154 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 BCKDHBP21953 392 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 RBMXP38159 391 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 OR3A2P47893 321 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 SUCLG1P53597 346 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 CLEC9AQ6UXN8 241 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 DMRTC2Q8IXT2 367 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 ARHGEF39Q8N4T4 335 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 EMG1Q92979 244 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 GALNT14Q96FL9 552 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 PIGQQ9BRB3 760 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 RTN4RQ9BZR6 473 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 CENPMQ9NSP4 180 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 PRODH2Q9UF12 536 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 MRPS28Q9Y2Q9 187 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 KNL1Q8NG31 2342 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 ABCA7Q8IZY2 2146 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 CXorf65A6NEN9 183 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 C17orf51A8MQB3 221 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 CDC14BO60729 498 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 KNG1P01042 644 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 IGHMP01871 453 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 CD63P08962 238 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 MMP16P51512 607 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 TMEM50BP56557 158 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 PPP1CAP62136 330 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF529Q6P280 563 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 REC114Q7Z4M0 266 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 STX12Q86Y82 276 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF610Q8N9Z0 462 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 OR5D14Q8NGL3 314 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 LMX1AQ8TE12 382 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 MEGF10Q96KG7 1140 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 IER2Q9BTL4 223 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 BANF2Q9H503 90 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 PLEKHA2Q9HB19 425 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 EHFQ9NZC4 300 aa15.97■□□□□ 0.15
CLSTN3-202ENST00000331148 SLC31A2O15432 143 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 DXOO77932 396 aaKnown RBP15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 SLC6A8P48029 635 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 C14orf28Q4W4Y0 310 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 C19orf47Q8N9M1 422 aaKnown RBP15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 OIT3Q8WWZ8 545 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 CPNE4Q96A23 557 aaPredicted RBP15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 ARHGAP5-AS1Q96IT6 56 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 C1orf147Q96MC9 270 aaPredicted RBP15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 GINS3Q9BRX5 216 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 ST6GALNAC5Q9BVH7 336 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 WFDC1Q9HC57 220 aa15.96■□□□□ 0.15
CLSTN3-202ENST00000331148 BORCS7-ASMTA0A0B4J1R7 106 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 SEC14L6B5MCN3 397 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 HCRTR2O43614 444 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 PRH1P02810 166 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 NXPH1P58417 271 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 CSNK2A1P68400 391 aaPredicted RBP15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 FMODQ06828 376 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 ARFRP1Q13795 201 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 SOHLH1Q5JUK2 328 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 DEGS2Q6QHC5 323 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 SUMF2Q8NBJ7 301 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 CSNK2A3Q8NEV1 391 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 DNASE2BQ8WZ79 361 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 RELTQ969Z4 430 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 TMEM59Q9BXS4 323 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 FAM60AQ9NP50 221 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 SDHAF3Q9NRP4 125 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 SUSD2Q9UGT4 822 aa15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 C14orf166Q9Y224 244 aaKnown RBP15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 STRAPQ9Y3F4 350 aaKnown RBP15.96■□□□□ 0.14
CLSTN3-202ENST00000331148 ARGFXA6NJG6 315 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms