RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 UTS2BQ765I0 119 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 GPR61Q9BZJ8 451 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 IL17BQ9UHF5 180 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 T-ENOLP0DO92 83 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 PCBP3P57721 371 aaKnown RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 MPPED2Q15777 294 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 TEX37Q96LM6 180 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 HYLS1Q96M11 299 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 NUMA1Q14980 2115 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 J3QKU1 62 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 GOSR2O14653 212 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 LIPFP07098 398 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 TAGLN2P37802 199 aaKnown RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 EMX1Q04741 257 aaPredicted RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 POU4F3Q15319 338 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 UBE2UQ5VVX9 321 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 CGB2Q6NT52 195 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 RBM45Q8IUH3 476 aaKnown RBP11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 BEST4Q8NFU0 473 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 OR5D18Q8NGL1 313 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 LGALS14Q8TCE9 139 aa11.87□□□□□ -0.51
PRPF38A-201ENST00000257181 CA6P23280 308 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 OR10R2Q8NGX6 335 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 MARS2Q96GW9 593 aaKnown RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 CPN1P15169 458 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 OR52N4Q8NGI2 321 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 ADAM19Q9H013 955 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 A0A0D9SG52 128 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 XKRY2A2RUG3 117 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 PHF1O43189 567 aaPredicted RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 CAPNS1P04632 268 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 SLC2A1P11166 492 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 Q6ZT83 130 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 RFPL4BQ6ZWI9 263 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 DDOQ99489 341 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 HSPB6O14558 160 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 CLEC3BP05452 202 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM106CPP0CH98 169 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 MGMTP16455 207 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 JUNBP17275 347 aaPredicted RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 ALDH3B2P48448 385 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 PAFAH1B2P68402 229 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 IL13RA2Q14627 380 aa11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 TXNL4BQ9NX01 149 aaKnown RBP11.86□□□□□ -0.51
PRPF38A-201ENST00000257181 OMGP23515 440 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 UNQ9370/PRO34162Q6UXP9 181 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 CFAP77Q6ZQR2 320 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 RNF2Q99496 336 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 FBP1P09467 338 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 ANXA7P20073 488 aaKnown RBP11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 PLPPR2Q96GM1 343 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 TXN2Q99757 166 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 FBXL2Q9UKC9 423 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 TGM1P22735 817 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 COMPP49747 757 aaPredicted RBP11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 CDK5Q00535 292 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 ELP2Q6IA86 826 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 CORO6Q6QEF8 472 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 ZNF703Q9H7S9 590 aaPredicted RBP11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 EXOGQ9Y2C4 368 aaKnown RBP11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 DHRS7CA6NNS2 312 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 WBP1Q96G27 269 aa11.85□□□□□ -0.51
PRPF38A-201ENST00000257181 CRYZL1O95825 349 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 HLA-DMAP28067 261 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 SLC25A30Q5SVS4 291 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 OR2G6Q5TZ20 316 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 SFRP4Q6FHJ7 346 aaPredicted RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 RHOUQ7L0Q8 258 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 MDP1Q86V88 176 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 OR10Z1Q8NGY1 313 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 GPR31O00270 319 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 ANGPTL7O43827 346 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 DXOO77932 396 aaKnown RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 HLA-AP01891 365 aaKnown RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 TSC22D1Q15714 1073 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 LILRB1Q8NHL6 650 aaPredicted RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 SUCNR1Q9BXA5 334 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 OPN3Q9H1Y3 402 aaPredicted RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 PATZ1Q9HBE1 687 aaKnown RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 MYEF2Q9P2K5 600 aaKnown RBP11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 SLC17A2O00624 439 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 HSD17B6O14756 317 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 ZNF273Q14593 569 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 IDO2Q6ZQW0 420 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 OR4S2Q8NH73 311 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 ADIPOR1Q96A54 375 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 UBQLN2Q9UHD9 624 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 TCRBV5S2A0A599 114 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A10PA6NDY2 464 aa11.84□□□□□ -0.51
PRPF38A-201ENST00000257181 FAM90A18PA6NE21 464 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms