RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NR4A2P43354 598 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 GATA4P43694 442 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 PRRC2AP48634 2157 aaKnown RBP11.22□□□□□ -0.61
MDC1-209ENST00000613547 GTF2A1P52655 376 aaPredicted RBP11.22□□□□□ -0.61
MDC1-209ENST00000613547 RIN1Q13671 783 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 CDK5R1Q15078 307 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 PLCXD3Q63HM9 321 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 Q6ZSR3 168 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 KRT74Q7RTS7 529 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 MOGAT3Q86VF5 341 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 NANOGP1Q8N7R0 232 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 OR13C3Q8NGS6 347 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 PP6455Q8WZ26 134 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 DVL3Q92997 716 aaPredicted RBP11.22□□□□□ -0.61
MDC1-209ENST00000613547 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
MDC1-209ENST00000613547 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 TECTBQ96PL2 329 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 BPESC1Q9GZL8 116 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 GCM1Q9NP62 436 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 ERVK-18Q9QC07 812 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 CACNG2Q9Y698 323 aa11.22□□□□□ -0.61
MDC1-209ENST00000613547 IGHV3-64DA0A0J9YX35 117 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 ANKRD61A6NGH8 418 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 OR5B21A6NL26 309 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 A6NLC8 198 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 TMEM210A6NLX4 147 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 VWC2LB2RUY7 222 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 H3BSH0 61 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 GATBO75879 557 aaKnown RBP11.21□□□□□ -0.61
MDC1-209ENST00000613547 ZFPL1O95159 310 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 PTBP3O95758 552 aaKnown RBP11.21□□□□□ -0.61
MDC1-209ENST00000613547 GRPP07492 148 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 FOSL1P15407 271 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 USF1P22415 310 aaPredicted RBP11.21□□□□□ -0.61
MDC1-209ENST00000613547 GABARAPL2P60520 117 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 BDH1Q02338 343 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 ZNF181Q2M3W8 571 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 CEACAM21Q3KPI0 293 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 SPRNQ5BIV9 151 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 PRAMEF6Q5VXH4 476 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 MOB3CQ70IA8 216 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 PRSS48Q7RTY5 328 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 RDH10Q8IZV5 341 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 OR5A2Q8NGI9 324 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
MDC1-209ENST00000613547 OR5P3Q8WZ94 311 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 SMIM19Q96E16 107 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 RNF170Q96K19 258 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 C18orf12Q96KH6 178 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 YTHDF1Q9BYJ9 559 aaKnown RBP11.21□□□□□ -0.61
MDC1-209ENST00000613547 UFSP2Q9NUQ7 469 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 PAK1IP1Q9NWT1 392 aaPredicted RBP11.21□□□□□ -0.61
MDC1-209ENST00000613547 UBAP1Q9NZ09 502 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 TREM2Q9NZC2 230 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
MDC1-209ENST00000613547 LOC100289279A0A1B0GTE1 492 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 OGG1O15527 345 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 MRPS14O60783 128 aaKnown RBP11.2□□□□□ -0.62
MDC1-209ENST00000613547 CD2P06729 351 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 HEXAP06865 529 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 OCM2P0CE71 109 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 OCMP0CE72 109 aaPredicted RBP11.2□□□□□ -0.62
MDC1-209ENST00000613547 CHN2P52757 468 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 GNG3P63215 75 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 LOXL1Q08397 574 aaPredicted RBP11.2□□□□□ -0.62
MDC1-209ENST00000613547 CNN3Q15417 329 aaKnown RBP11.2□□□□□ -0.62
MDC1-209ENST00000613547 SPHARQ15513 63 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 MED22Q15528 200 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 CEP78Q5JTW2 689 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 TMEM42Q69YG0 159 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 ZNF485Q8NCK3 441 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 Q8TCH9 128 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 GPR148Q8TDV2 347 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 COX4I2Q96KJ9 171 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 PDCD1LG2Q9BQ51 273 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 CHST5Q9GZS9 411 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 NEK6Q9HC98 313 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 SLC7A11Q9UPY5 501 aa11.2□□□□□ -0.62
MDC1-209ENST00000613547 MAP1AP78559 2803 aaPredicted RBP11.2□□□□□ -0.62
MDC1-209ENST00000613547 FLNAP21333 2647 aaKnown RBP11.19□□□□□ -0.62
MDC1-209ENST00000613547 hCG_1807616A0A1W2PRN6 198 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 ISPDA4D126 451 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 LRP5LA4QPB2 252 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 TMEM178BH3BS89 294 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 SMAD7O15105 426 aaKnown RBP11.19□□□□□ -0.62
MDC1-209ENST00000613547 LALBAP00709 142 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 MT-ND2P03891 347 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 GPM6AP51674 278 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 ACSM1Q08AH1 577 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 ZNF154Q13106 437 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 IRF3Q14653 427 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 MPPED2Q15777 294 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 XAF1Q6GPH4 301 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 SVOPQ8N4V2 548 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 OR1M1Q8NGA1 313 aa11.19□□□□□ -0.62
MDC1-209ENST00000613547 OR51A4Q8NGJ6 313 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms