RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 IGKV1-9A0A0C4DH69 117 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 UBE2QL1A1L167 161 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ZNF736B4DX44 427 aaPredicted RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 E9PLN8 166 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 SNAPC5O75971 98 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 MPIG6BO95866 241 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 CD3DP04234 171 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 DBHP09172 617 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 MMP7P09237 267 aaPredicted RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 NAT2P11245 290 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 MPZP25189 248 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ARR3P36575 388 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 PTGFRP43088 359 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 OR3A4PP47883 348 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 VEGFCP49767 419 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 TNFSF10P50591 281 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ARF1P84077 181 aaKnown RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 TGIF1Q15583 401 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 KISS1Q15726 138 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 MOGAT2Q3SYC2 334 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ACTBL2Q562R1 376 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ATP1A1-AS1Q5TC04 95 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 RTL6Q6ICC9 239 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 IGFL2Q6UWQ7 119 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 TMPRSS7Q7RTY8 843 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 FJX1Q86VR8 437 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 SPICQ8N5J4 248 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ZFAND1Q8TCF1 268 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 NKX3-1Q99801 234 aaPredicted RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 ALX4Q9H161 411 aaPredicted RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 IFT46Q9NQC8 304 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
LIG3-204ENST00000585740 GLRX2Q9NS18 164 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 SLC7A10Q9NS82 523 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 SLC2A8Q9NY64 477 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ZNF224Q9NZL3 707 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 PLEKHA6Q9Y2H5 1048 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 RAXQ9Y2V3 346 aa9.83□□□□□ -0.84
LIG3-204ENST00000585740 ZNF407Q9C0G0 2248 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 TRAV17A0A0B4J275 112 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 TMEM235A6NFC5 223 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 CA11O75493 328 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 FAHP16930 419 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 GNG2P59768 71 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 PPA1Q15181 289 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 SNAI3Q3KNW1 292 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 PABPC1L2AQ5JQF8 200 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 CLVS2Q5SYC1 327 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 ZNF626Q68DY1 528 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 LHFPL2Q6ZUX7 228 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 NCCRP1Q6ZVX7 275 aaPredicted RBP9.82□□□□□ -0.84
LIG3-204ENST00000585740 TRAPPC6BQ86SZ2 158 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 VASH2Q86V25 355 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 OR11H7Q8NGC8 314 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 FNDC9Q8TBE3 224 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 TNFAIP8L1Q8WVP5 186 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 WDYHV1Q96HA8 205 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 C1orf147Q96MC9 270 aaPredicted RBP9.82□□□□□ -0.84
LIG3-204ENST00000585740 PRRT1Q99946 306 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 GAL3ST1Q99999 423 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 TM2D1Q9BX74 207 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 C1QTNF5Q9BXJ0 243 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 MYOZ1Q9NP98 299 aaPredicted RBP9.82□□□□□ -0.84
LIG3-204ENST00000585740 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.82□□□□□ -0.84
LIG3-204ENST00000585740 MYEF2Q9P2K5 600 aaKnown RBP9.82□□□□□ -0.84
LIG3-204ENST00000585740 FLVCR2Q9UPI3 526 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 NPTNQ9Y639 398 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 MYO7BQ6PIF6 2116 aa9.82□□□□□ -0.84
LIG3-204ENST00000585740 hCG_38984A0A1B0GV85 526 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 C5orf63A6NC05 138 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 MEIS3P1A6NDR6 274 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 PYCARD-AS1I3L0S3 204 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 NKX2-8O15522 239 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 ZNF780AO75290 641 aaPredicted RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 CRTAPO75718 401 aaPredicted RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 IGHG3P01860 377 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 PRB1P04280 392 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 AMY2AP04746 511 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 SERPINA5P05154 406 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 HIST1H1DP16402 221 aaKnown RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 RAD52P43351 418 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 CCL11P51671 97 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 RPS27AP62979 156 aaKnown RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 UBE2V2Q15819 145 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 RNASE10Q5GAN6 216 aaKnown RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 SFRP5Q5T4F7 317 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 TMEM42Q69YG0 159 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 FAAP20Q6NZ36 180 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 SLC36A1Q7Z2H8 476 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 BPIFB2Q8N4F0 458 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 FAM89BQ8N5H3 189 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 ASCC1Q8N9N2 400 aaKnown RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 OR51S1Q8NGJ8 323 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 OR51T1Q8NGJ9 327 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 OR8S1Q8NH09 359 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 ASB13Q8WXK3 278 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 NANOS1Q8WY41 292 aaKnown RBP9.81□□□□□ -0.84
LIG3-204ENST00000585740 SPSB4Q96A44 273 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms