RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 F8P00451 2351 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 TRBV2A0A0J9YWF9 115 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 LOC100289279A0A1B0GTE1 492 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 DHRS7CA6NNS2 312 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 H3BSH0 61 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 SLC1A7O00341 560 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 MYL12BO14950 172 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 ISG15P05161 165 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 FAHP16930 419 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 MPPED2Q15777 294 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF181Q2M3W8 571 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 CEACAM21Q3KPI0 293 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 CCDC58Q4VC31 144 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 CLVS2Q5SYC1 327 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 OR2G6Q5TZ20 316 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 PRAMEF6Q5VXH4 476 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 RPL22L1Q6P5R6 122 aaKnown RBP13.49□□□□□ -0.25
RAB40C-208ENST00000564703 OR5A2Q8NGI9 324 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 OR14K1Q8NGZ2 314 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 OR5AK2Q8NH90 309 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 OR5P3Q8WZ94 311 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 NARFLQ9H6Q4 476 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 RNF7Q9UBF6 113 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 HHLA2Q9UM44 414 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
RAB40C-208ENST00000564703 ACANP16112 2415 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 hCG_1807616A0A1W2PRN6 198 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 LRP5LA4QPB2 252 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 TMEM210A6NLX4 147 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 TMEM212A6NML5 194 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 CCL1P22362 96 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 KIR3DL2P43630 455 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 TGM4P49221 684 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 NANOS3P60323 173 aaKnown RBP13.48□□□□□ -0.25
RAB40C-208ENST00000564703 PLCXD3Q63HM9 321 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 CYB5R2Q6BCY4 276 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 CLEC9AQ6UXN8 241 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 KRT74Q7RTS7 529 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 OR1M1Q8NGA1 313 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 OR52N1Q8NH53 320 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 GATAD2BQ8WXI9 593 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 C10orf35Q96D05 121 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 ITPKCQ96DU7 683 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 GAL3ST1Q99999 423 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 CLEC2DQ9UHP7 191 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 SLC7A11Q9UPY5 501 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 PCDHGB5Q9Y5G0 923 aa13.48□□□□□ -0.25
RAB40C-208ENST00000564703 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
RAB40C-208ENST00000564703 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 LOC107986453A0A1B0GWG9 222 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 A6NIN4 97 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 OR4C45A6NMZ5 311 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF732B4DXR9 585 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 E9PI62 339 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-208ENST00000564703 CDK1P06493 297 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 ZNF20P17024 532 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 C21orf33P30042 268 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-208ENST00000564703 GZMKP49863 264 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 GNG3P63215 75 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 TMEM249Q2WGJ8 235 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 Q6ZSR3 168 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 MUC20Q8N307 709 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-208ENST00000564703 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
RAB40C-208ENST00000564703 Q8TCH9 128 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 RNF166Q96A37 237 aaPredicted RBP13.47□□□□□ -0.25
RAB40C-208ENST00000564703 PPP1R3EQ9H7J1 279 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 TRIM36Q9NQ86 728 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 BLOC1S6Q9UL45 172 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 HIVEP1P15822 2718 aa13.47□□□□□ -0.25
RAB40C-208ENST00000564703 ANKRD61A6NGH8 418 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 OR5B21A6NL26 309 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 GATBO75879 557 aaKnown RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 PTBP3O95758 552 aaKnown RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 LY6G6DO95868 133 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 OCM2P0CE71 109 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 OCMP0CE72 109 aaPredicted RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 EEF1B2P24534 225 aaKnown RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 PMELP40967 661 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 GPM6AP51674 278 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 GTF2A1P52655 376 aaPredicted RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 TAS2R43P59537 309 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 BTG1P62324 171 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 RBM48Q5RL73 367 aaKnown RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 LRRC28Q86X40 367 aaPredicted RBP13.46□□□□□ -0.25
RAB40C-208ENST00000564703 SPICQ8N5J4 248 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 OR13C3Q8NGS6 347 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 CLDND2Q8NHS1 167 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 PP6455Q8WZ26 134 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 FGGYQ96C11 551 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 RAB39BQ96DA2 213 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 SMR3AQ99954 134 aa13.46□□□□□ -0.25
RAB40C-208ENST00000564703 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms