RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MSR1P21757 451 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 CDAP32320 146 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 NPY4RP50391 375 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 IL15RAQ13261 267 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 KISS1Q15726 138 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 ZSCAN4Q8NAM6 433 aaPredicted RBP14.24□□□□□ -0.13
TUBB3-209ENST00000555609 OR13G1Q8NGZ3 307 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 TMEM54Q969K7 222 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 INTS12Q96CB8 462 aaKnown RBP14.24□□□□□ -0.13
TUBB3-209ENST00000555609 DUSP23Q9BVJ7 150 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 DEFB126Q9BYW3 111 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 BANF2Q9H503 90 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 CA14Q9ULX7 337 aa14.24□□□□□ -0.13
TUBB3-209ENST00000555609 IGKV1-9A0A0C4DH69 117 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 H0YIZ8 118 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 NUPL2O15504 423 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 EIF1BO60739 113 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 DHRS3O75911 302 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 OR2J2O76002 312 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CSTBP04080 98 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CPT2P23786 658 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 ZNF84P51523 738 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SUPT4H1P63272 117 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CSNK2A1P68400 391 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 HIST1H3AP68431 136 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 HIST2H3PS2Q5TEC6 136 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 AADACL3Q5VUY0 350 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 ZNF574Q6ZN55 896 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 HIST2H3AQ71DI3 136 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 POC1AQ8NBT0 407 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SLC38A9Q8NBW4 561 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CSNK2A3Q8NEV1 391 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 OR10Z1Q8NGY1 313 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CRB3Q9BUF7 120 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 NELFAQ9H3P2 528 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 EDARQ9UNE0 448 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 C14orf166Q9Y224 244 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 PCDHGA1Q9Y5H4 931 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 KNL1Q8NG31 2342 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 A0A1W2PNR3 127 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 FAM157CP0CG43 387 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CSNK1A1P48729 337 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SNU13P55769 128 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 PJVKQ0ZLH3 352 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 TMEM176BQ3YBM2 270 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 CARD17Q5XLA6 110 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SPAG16Q8N0X2 631 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SPACA5Q96QH8 159 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 S100A13Q99584 98 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SPSB2Q99619 263 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 PECRQ9BY49 303 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 SEC11CQ9BY50 192 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 METTL8Q9H825 291 aaKnown RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 ZNF160Q9HCG1 818 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 C1orf123Q9NWV4 160 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 ATXN7L1Q9ULK2 861 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-209ENST00000555609 PRELID3BQ9Y3B1 194 aa14.23□□□□□ -0.13
TUBB3-209ENST00000555609 FER1L5A0AVI2 2057 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 DHRS7CA6NNS2 312 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 SLC2A1P11166 492 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 RPS2P15880 293 aaKnown RBP14.22□□□□□ -0.13
TUBB3-209ENST00000555609 H3F3AP84243 136 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 SCRN3Q0VDG4 424 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 SLC9A3R2Q15599 337 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 ZNF585AQ6P3V2 769 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 SPEM1Q8N4L4 309 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 WDSUB1Q8N9V3 476 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 PAQR8Q8TEZ7 354 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 HAS2Q92819 552 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 RRNAD1Q96FB5 475 aaKnown RBP14.22□□□□□ -0.13
TUBB3-209ENST00000555609 CPNE2Q96FN4 548 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-209ENST00000555609 SHDQ96IW2 340 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 RASL10BQ96S79 203 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 NAA11Q9BSU3 229 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-209ENST00000555609 SOX7Q9BT81 388 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 CHST5Q9GZS9 411 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 LPAR3Q9UBY5 353 aa14.22□□□□□ -0.13
TUBB3-209ENST00000555609 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 FAM74A7A6NL05 159 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 SNAPINO95295 136 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 PLATP00750 562 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 BLVRBP30043 206 aaPredicted RBP14.21□□□□□ -0.13
TUBB3-209ENST00000555609 DHPSP49366 369 aaPredicted RBP14.21□□□□□ -0.13
TUBB3-209ENST00000555609 CLDN17P56750 224 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 STARD6P59095 220 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 ANKRD55Q3KP44 614 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 CHRFAM7AQ494W8 412 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 FAM74A3Q4VXF1 159 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 DHRS7BQ6IAN0 325 aaPredicted RBP14.21□□□□□ -0.13
TUBB3-209ENST00000555609 RNF144BQ7Z419 303 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 ADAMTS17Q8TE56 1095 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 SMIM8Q96KF7 97 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 SLC5A7Q9GZV3 580 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 EHFQ9NZC4 300 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 NXT1Q9UKK6 140 aaKnown RBP14.21□□□□□ -0.13
TUBB3-209ENST00000555609 POMT1Q9Y6A1 747 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 BDP1A6H8Y1 2624 aa14.21□□□□□ -0.13
TUBB3-209ENST00000555609 ZNF814B7Z6K7 855 aa14.21□□□□□ -0.14
TUBB3-209ENST00000555609 H7C2Y5 167 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms