RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	IKZF5	Q9H5V7	419 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	CCDC134	Q9H6E4	229 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	POLE4	Q9NR33	117 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	ATPIF1	Q9UII2	106 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SLC7A7	Q9UM01	511 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	STARD10	Q9Y365	291 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	KPTN	Q9Y664	436 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	TET2	Q6N021	2002 aa	Predicted RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	IQCF6	A8MYZ5	107 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412		F5H5P2	479 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412		K7EIL1	84 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	SGCE	O43556	437 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	SHOX2	O60902	331 aa	Predicted RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	SNN	O75324	88 aa	Predicted RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	PTBP3	O95758	552 aa	Known RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	VIM	P08670	466 aa	Known RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	IRF2	P14316	349 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	FUT1	P19526	365 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	CD200	P41217	278 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	KIR2DS4	P43632	304 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	HTR5A	P47898	357 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	RGS6	P49758	472 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.91	□□□□□ -1.62	3e-6	■■■□□ 16.5
PICALM-223	ENST00000534412	STX3	Q13277	289 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	KCNJ8	Q15842	424 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	OR2T2	Q6IF00	324 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	C16orf89	Q6UX73	402 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	C18orf65	Q6ZTR6	163 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	RBM45	Q8IUH3	476 aa	Known RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	OR5AS1	Q8N127	324 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	KLHDC1	Q8N7A1	406 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	SPERT	Q8NA61	448 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	OR4S1	Q8NGB4	309 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	OR52N4	Q8NGI2	321 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	PFN4	Q8NHR9	129 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	ANP32B	Q92688	251 aa	Known RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	ZNF582	Q96NG8	517 aa	Predicted RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	C20orf141	Q9NUB4	165 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	VAPA	Q9P0L0	249 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	ERVK-18	Q9QC07	812 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	RAB21	Q9UL25	225 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	TMCC3	Q9ULS5	477 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	ANGPT4	Q9Y264	503 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	CAB39	Q9Y376	341 aa	Predicted RBP	4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	FAM96B	Q9Y3D0	163 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	PLXNB1	O43157	2135 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	STAB2	Q8WWQ8	2551 aa		4.91	□□□□□ -1.62
PICALM-223	ENST00000534412	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.9	□□□□□ -1.62
PICALM-223	ENST00000534412	IGHV3-64D	A0A0J9YX35	117 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FAM90A18P	A6NE21	464 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FAM90A16P	A6NEW6	464 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	ANKRD61	A6NGH8	418 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FAM90A9P	A6NNJ1	464 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FAM90A5P	A8MXJ8	464 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	LGALS8	O00214	317 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	UBD	O15205	165 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	POLR3G	O15318	223 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	NDUFA2	O43678	99 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OR10H3	O60404	316 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	ECD	O95905	644 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OPN1SW	P03999	348 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FAM90A15P	P0C7V4	464 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FAM90A14P	P0C7W9	464 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	GUCA1A	P43080	201 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	CRYBA2	P53672	197 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	RPL27	P61353	136 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	ARF6	P62330	175 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	AQP6	Q13520	282 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	ALG10	Q5BKT4	473 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	VMO1	Q7Z5L0	202 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	CALHM3	Q86XJ0	350 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	SLC30A8	Q8IWU4	369 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	LRRC75A	Q8NAA5	344 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	LY6G5B	Q8NDX9	201 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	C19orf18	Q8NEA5	215 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	WFDC9	Q8NEX5	89 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OR4F17	Q8NGA8	305 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OR4C13	Q8NGP0	309 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OR11L1	Q8NGX0	322 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	TMEM255B	Q8WV15	326 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	SLC7A6	Q92536	515 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	SGTB	Q96EQ0	304 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	MED30	Q96HR3	178 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	RBP7	Q96R05	134 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OR4F4	Q96R69	305 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	OR52B2	Q96RD2	323 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	ECSIT	Q9BQ95	431 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	TMEM109	Q9BVC6	243 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	SEMA6A	Q9H2E6	1030 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	PPA2	Q9H2U2	334 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	PTTG3P	Q9NZH4	202 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	KAAG1	Q9UBP8	84 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	FOXJ3	Q9UPW0	622 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	SIGLEC9	Q9Y336	463 aa		4.9	□□□□□ -1.63
PICALM-223	ENST00000534412	MAB21L2	Q9Y586	359 aa		4.9	□□□□□ -1.63

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