RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 OR51E1Q8TCB6 317 aa8.83□□□□□ -1
CD44-227ENST00000528086 LRRC29Q8WV35 223 aa8.83□□□□□ -1
CD44-227ENST00000528086 TAF15Q92804 592 aaKnown RBP eCLIP8.83□□□□□ -1
CD44-227ENST00000528086 UPRTQ96BW1 309 aa8.83□□□□□ -1
CD44-227ENST00000528086 RIBC2Q9H4K1 309 aa8.83□□□□□ -1
CD44-227ENST00000528086 NIPAL2Q9H841 368 aa8.83□□□□□ -1
CD44-227ENST00000528086 RNPEPL1Q9HAU8 725 aa8.83□□□□□ -1
CD44-227ENST00000528086 GPR84Q9NQS5 396 aa8.83□□□□□ -1
CD44-227ENST00000528086 SLC22A13Q9Y226 551 aa8.83□□□□□ -1
CD44-227ENST00000528086 AUP1Q9Y679 476 aa8.83□□□□□ -1
CD44-227ENST00000528086 DSCAML1Q8TD84 2053 aa8.82□□□□□ -1
CD44-227ENST00000528086 MDFIC2A0A1B0GVS7 189 aa8.82□□□□□ -1
CD44-227ENST00000528086 A0A1W2PQL4 384 aaPredicted RBP8.82□□□□□ -1
CD44-227ENST00000528086 ACOD1A6NK06 481 aa8.82□□□□□ -1
CD44-227ENST00000528086 PHYHO14832 338 aa8.82□□□□□ -1
CD44-227ENST00000528086 ADAM20O43506 726 aa8.82□□□□□ -1
CD44-227ENST00000528086 APOC1P02654 83 aa8.82□□□□□ -1
CD44-227ENST00000528086 SFTPBP07988 381 aa8.82□□□□□ -1
CD44-227ENST00000528086 FAHP16930 419 aa8.82□□□□□ -1
CD44-227ENST00000528086 CFL1P23528 166 aaKnown RBP8.82□□□□□ -1
CD44-227ENST00000528086 CPT2P23786 658 aa8.82□□□□□ -1
CD44-227ENST00000528086 HTR1FP30939 366 aa8.82□□□□□ -1
CD44-227ENST00000528086 TGM4P49221 684 aa8.82□□□□□ -1
CD44-227ENST00000528086 GNB2P62879 340 aa8.82□□□□□ -1
CD44-227ENST00000528086 ZIK1Q3SY52 487 aaPredicted RBP8.82□□□□□ -1
CD44-227ENST00000528086 WDR38Q5JTN6 314 aa8.82□□□□□ -1
CD44-227ENST00000528086 CEP78Q5JTW2 689 aa8.82□□□□□ -1
CD44-227ENST00000528086 STUMQ69YW2 141 aa8.82□□□□□ -1
CD44-227ENST00000528086 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.82□□□□□ -1
CD44-227ENST00000528086 ELMOD2Q8IZ81 293 aa8.82□□□□□ -1
CD44-227ENST00000528086 FAM216BQ8N7L0 139 aa8.82□□□□□ -1
CD44-227ENST00000528086 SIGLECL1Q8N7X8 197 aa8.82□□□□□ -1
CD44-227ENST00000528086 OR5T2Q8NGG2 359 aa8.82□□□□□ -1
CD44-227ENST00000528086 OR8B3Q8NGG8 313 aa8.82□□□□□ -1
CD44-227ENST00000528086 OR51G2Q8NGK0 314 aa8.82□□□□□ -1
CD44-227ENST00000528086 OR14K1Q8NGZ2 314 aa8.82□□□□□ -1
CD44-227ENST00000528086 PIGCQ92535 297 aa8.82□□□□□ -1
CD44-227ENST00000528086 HRASLS5Q96KN8 279 aa8.82□□□□□ -1
CD44-227ENST00000528086 OR8B2Q96RD0 313 aa8.82□□□□□ -1
CD44-227ENST00000528086 TBX15Q96SF7 602 aa8.82□□□□□ -1
CD44-227ENST00000528086 TBX5Q99593 518 aa8.82□□□□□ -1
CD44-227ENST00000528086 CCL13Q99616 98 aa8.82□□□□□ -1
CD44-227ENST00000528086 NUDT16L1Q9BRJ7 211 aaKnown RBP8.82□□□□□ -1
CD44-227ENST00000528086 ZNF649Q9BS31 505 aa8.82□□□□□ -1
CD44-227ENST00000528086 OR51I2Q9H344 312 aa8.82□□□□□ -1
CD44-227ENST00000528086 SP140LQ9H930 580 aa8.82□□□□□ -1
CD44-227ENST00000528086 CLN6Q9NWW5 311 aa8.82□□□□□ -1
CD44-227ENST00000528086 KAAG1Q9UBP8 84 aa8.82□□□□□ -1
CD44-227ENST00000528086 NUP50Q9UKX7 468 aa8.82□□□□□ -1
CD44-227ENST00000528086 MPC1Q9Y5U8 109 aa8.82□□□□□ -1
CD44-227ENST00000528086 A0A0A6YYJ9 748 aa8.81□□□□□ -1
CD44-227ENST00000528086 hCG_1807616A0A1W2PRN6 198 aa8.81□□□□□ -1
CD44-227ENST00000528086 A6NIN4 97 aa8.81□□□□□ -1
CD44-227ENST00000528086 SLC22A31A6NKX4 558 aa8.81□□□□□ -1
CD44-227ENST00000528086 DVL1O14640 695 aa8.81□□□□□ -1
CD44-227ENST00000528086 AKR7A2O43488 359 aa8.81□□□□□ -1
CD44-227ENST00000528086 ENTPD6O75354 484 aa8.81□□□□□ -1
CD44-227ENST00000528086 ZNF254O75437 659 aa8.81□□□□□ -1
CD44-227ENST00000528086 CIB2O75838 187 aa8.81□□□□□ -1
CD44-227ENST00000528086 PPIAL4GP0DN37 164 aa8.81□□□□□ -1
CD44-227ENST00000528086 IRF2P14316 349 aa8.81□□□□□ -1
CD44-227ENST00000528086 KIR3DL2P43630 455 aa8.81□□□□□ -1
CD44-227ENST00000528086 GPM6AP51674 278 aa8.81□□□□□ -1
CD44-227ENST00000528086 RIDAP52758 137 aaKnown RBP8.81□□□□□ -1
CD44-227ENST00000528086 DLX1P56177 255 aa8.81□□□□□ -1
CD44-227ENST00000528086 FGF12P61328 243 aa8.81□□□□□ -1
CD44-227ENST00000528086 LCN1P1Q5VSP4 162 aa8.81□□□□□ -1
CD44-227ENST00000528086 LIPNQ5VXI9 398 aa8.81□□□□□ -1
CD44-227ENST00000528086 KCTD18Q6PI47 426 aaPredicted RBP8.81□□□□□ -1
CD44-227ENST00000528086 DOK3Q7L591 496 aa8.81□□□□□ -1
CD44-227ENST00000528086 PRSS35Q8N3Z0 413 aa8.81□□□□□ -1
CD44-227ENST00000528086 CBR4Q8N4T8 237 aa8.81□□□□□ -1
CD44-227ENST00000528086 OR8J1Q8NGP2 316 aa8.81□□□□□ -1
CD44-227ENST00000528086 OR8S1Q8NH09 359 aa8.81□□□□□ -1
CD44-227ENST00000528086 ASB17Q8WXJ9 295 aa8.81□□□□□ -1
CD44-227ENST00000528086 RORBQ92753 470 aa8.81□□□□□ -1
CD44-227ENST00000528086 FAM71F1Q96KD3 344 aaPredicted RBP8.81□□□□□ -1
CD44-227ENST00000528086 RAB3IPQ96QF0 476 aaPredicted RBP8.81□□□□□ -1
CD44-227ENST00000528086 RBM4BQ9BQ04 359 aaKnown RBP8.81□□□□□ -1
CD44-227ENST00000528086 MROQ9BYG7 248 aa8.81□□□□□ -1
CD44-227ENST00000528086 SIRPDQ9H106 197 aa8.81□□□□□ -1
CD44-227ENST00000528086 S100A14Q9HCY8 104 aa8.81□□□□□ -1
CD44-227ENST00000528086 C14orf119Q9NWQ9 140 aa8.81□□□□□ -1
CD44-227ENST00000528086 CLN8Q9UBY8 286 aa8.81□□□□□ -1
CD44-227ENST00000528086 OR5V1Q9UGF6 321 aa8.81□□□□□ -1
CD44-227ENST00000528086 WARS2Q9UGM6 360 aaKnown RBP8.81□□□□□ -1
CD44-227ENST00000528086 ZNF222Q9UK12 451 aa8.81□□□□□ -1
CD44-227ENST00000528086 OR52A1Q9UKL2 312 aa8.81□□□□□ -1
CD44-227ENST00000528086 NOP16Q9Y3C1 178 aaKnown RBP8.81□□□□□ -1
CD44-227ENST00000528086 R4GMQ9 66 aa8.81□□□□□ -1
CD44-227ENST00000528086 V9GYS6 101 aa8.81□□□□□ -1
CD44-227ENST00000528086 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
CD44-227ENST00000528086 TRAV38-1A0A0B4J264 116 aa8.8□□□□□ -1
CD44-227ENST00000528086 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.8□□□□□ -1
CD44-227ENST00000528086 ZNF816-ZNF321PA0A0X1KG74 233 aa8.8□□□□□ -1
CD44-227ENST00000528086 ZNF732B4DXR9 585 aa8.8□□□□□ -1
CD44-227ENST00000528086 P2RY10O00398 339 aa8.8□□□□□ -1
CD44-227ENST00000528086 SYNGR1O43759 233 aa8.8□□□□□ -1
CD44-227ENST00000528086 CCL1P22362 96 aa8.8□□□□□ -1
CD44-227ENST00000528086 GMFBP60983 142 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms