RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SLC36A1Q7Z2H8 476 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 WDR86Q86TI4 376 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 FAM90A1Q86YD7 464 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 ZDHHC23Q8IYP9 409 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF679Q8IYX0 411 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 OR10Z1Q8NGY1 313 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 FAM81AQ8TBF8 368 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 EME1Q96AY2 570 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 C12orf43Q96C57 262 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 MNTQ99583 582 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 OSBPL10Q9BXB5 764 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 GABARAPL1Q9H0R8 117 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 TLNRD1Q9H1K6 362 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 H2AFY2Q9P0M6 372 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 KAAG1Q9UBP8 84 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF816-ZNF321PA0A0X1KG74 233 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 TMEM269A0A1B0GVZ9 245 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 CCDC182A6NF36 153 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 SAC3D1A6NKF1 404 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 SRRM5B3KS81 715 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 P2RY10O00398 339 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 PRKYO43930 277 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 EGR1P18146 543 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 ACKR3P25106 362 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 CFHR2P36980 270 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 MAP2K3P46734 347 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 RIDAP52758 137 aaKnown RBP11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 FGF12P61328 243 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 CSNK2BP67870 215 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 ROM1Q03395 351 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 SLC34A1Q06495 639 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 SLX4IPQ5VYV7 408 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 NXNL2Q5VZ03 156 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 KDM4DQ6B0I6 523 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 KCTD8Q6ZWB6 473 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 COMMD2Q86X83 199 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 GID4Q8IVV7 300 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 PIGCQ92535 297 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 HIST1H2AAQ96QV6 131 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 C9orf16Q9BUW7 83 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 MOB1AQ9H8S9 216 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 SMURF1Q9HCE7 757 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 FAM206AQ9NX38 181 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 ORC6Q9Y5N6 252 aa11.47□□□□□ -0.57
SPTLC1-207ENST00000488921 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 IGHV3OR16-10A0A075B7F0 116 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ZAR1LA6NP61 321 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF850A8MQ14 1090 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF879B4DU55 563 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 CLDN34H7C241 214 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 CDIPTO14735 213 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 TNFRSF13BO14836 293 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 GPR37O15354 613 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ATP6V1G2O95670 118 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 CFPP27918 469 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ZBTB37Q5TC79 503 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 METTL11BQ5VVY1 283 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ZBTB49Q6ZSB9 765 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 MEPCEQ7L2J0 689 aaKnown RBP11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 C11orf53Q8IXP5 236 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 C3orf56Q8N813 242 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 TCEANCQ8N8B7 351 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 TMEM163Q8TC26 289 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 OR5P3Q8WZ94 311 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 LYZL4Q96KX0 146 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF48Q96MX3 618 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 OR8B4Q96RC9 309 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 DNTTIP1Q9H147 329 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 VCXQ9H320 206 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 NUFIP1Q9UHK0 495 aaKnown RBP11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 OAZ3Q9UMX2 235 aa11.46□□□□□ -0.57
SPTLC1-207ENST00000488921 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 PSMD9O00233 223 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 DVL1O14640 695 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 MTRF1O75570 445 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 TOX4O94842 621 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 RNASE1P07998 156 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 HCCSP53701 268 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 FOXL1Q12952 345 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 PDCD1Q15116 288 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 WDR38Q5JTN6 314 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 C12orf73Q69YU5 71 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 BTN2A1Q7KYR7 527 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 THAP5Q7Z6K1 395 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 ST8SIA4Q92187 359 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 RNF170Q96K19 258 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 CIB1Q99828 191 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 PBOV1Q9GZY1 135 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 VCX3BQ9H321 246 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
SPTLC1-207ENST00000488921 DNAJB11Q9UBS4 358 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms