RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR8G5Q8NG78 346 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 ITFG2Q969R8 447 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 ISOC1Q96CN7 298 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 SMIM19Q96E16 107 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 PELI1Q96FA3 418 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 ELMOD3Q96FG2 381 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 SLC30A2Q9BRI3 323 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 NARFLQ9H6Q4 476 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 PPP1R3EQ9H7J1 279 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 ISG20L2Q9H9L3 353 aaKnown RBP10.35□□□□□ -0.75
PTPRF-213ENST00000481019 CHODLQ9H9P2 273 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 BRD7Q9NPI1 651 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 TUBG2Q9NRH3 451 aa10.35□□□□□ -0.75
PTPRF-213ENST00000481019 MRM2Q9UI43 246 aaKnown RBP10.35□□□□□ -0.75
PTPRF-213ENST00000481019 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 HIVEP2P31629 2446 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 A0A1B0GWJ7 208 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 TRDV1A0A1B0GX56 115 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 INAFM1C9JVW0 142 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 F5H5P2 479 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 TPD52L2O43399 206 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 GATBO75879 557 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 GABARAPO95166 117 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 ANXA2P07355 339 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 HOXB4P17483 251 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 ACHEP22303 614 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 MMP16P51512 607 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 MRPS11P82912 194 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 TNFAIP6P98066 277 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 HOXA4Q00056 320 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 ALKBH1Q13686 389 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 CDK5R1Q15078 307 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 YIF1BQ5BJH7 314 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 FAM209AQ5JX71 171 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 DMKNQ6E0U4 476 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 SSX6Q7RTT6 188 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 CCDC54Q8NEL0 328 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 ITLN1Q8WWA0 313 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 DVL3Q92997 716 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 PPP1R14AQ96A00 147 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 REPIN1Q9BWE0 567 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 RBM38Q9H0Z9 239 aaKnown RBP10.34□□□□□ -0.75
PTPRF-213ENST00000481019 SAP30LQ9HAJ7 183 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 CYSLTR2Q9NS75 346 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 DECR2Q9NUI1 292 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 ZDHHC8Q9ULC8 765 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 ZNF281Q9Y2X9 895 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 LRP12Q9Y561 859 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 R4GMQ9 66 aa10.34□□□□□ -0.75
PTPRF-213ENST00000481019 TMEM269A0A1B0GVZ9 245 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 CD300LBA8K4G0 201 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 TBX1O43435 398 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 PPIHO43447 177 aaKnown RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 CD5LO43866 347 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 ZNF12P17014 697 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 ZNF16P17020 682 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 FGF9P31371 208 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 PMELP40967 661 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 RANBP1P43487 201 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 GPR6P46095 362 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM244Q5VVB8 128 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 USP43Q70EL4 1123 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 PGAP1Q75T13 922 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 MRPL21Q7Z2W9 205 aaKnown RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 OR5AK2Q8NH90 309 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 CLDND2Q8NHS1 167 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 SPSB4Q96A44 273 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 C12orf43Q96C57 262 aaKnown RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 MSI2Q96DH6 328 aaKnown RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 LYZL4Q96KX0 146 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 KCTD7Q96MP8 289 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 OR2V2Q96R30 315 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 EXOSC4Q9NPD3 245 aaKnown RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 ACOXLQ9NUZ1 547 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 CGGBP1Q9UFW8 167 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-213ENST00000481019 MALRD1Q5VYJ5 2156 aa10.33□□□□□ -0.76
PTPRF-213ENST00000481019 DYSFO75923 2080 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 MXRA5Q9NR99 2828 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 LOC110117498-PIK3R3F6TDL0 507 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 SRSF10O75494 262 aaKnown RBP10.32□□□□□ -0.76
PTPRF-213ENST00000481019 RGS9O75916 674 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-213ENST00000481019 RPP14O95059 124 aaKnown RBP10.32□□□□□ -0.76
PTPRF-213ENST00000481019 UBCP0CG48 685 aaKnown RBP10.32□□□□□ -0.76
PTPRF-213ENST00000481019 CA6P23280 308 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 TGFBR2P37173 567 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 SERPINB10P48595 397 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM33P57088 247 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 LMO4P61968 165 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 FAM3AP98173 230 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 SLC3A1Q07837 685 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 MFGE8Q08431 387 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-213ENST00000481019 MALLQ13021 153 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 MAB21L1Q13394 359 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 SSX1Q16384 188 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 GFOD2Q3B7J2 385 aa10.32□□□□□ -0.76
PTPRF-213ENST00000481019 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms