RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CDKN2BP42772 138 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SLC1A2P43004 574 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 NAMPTP43490 491 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MRPL19P49406 292 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CDC34P49427 236 aaPredicted RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SRP9P49458 86 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CSNK1EP49674 416 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 AP3S2P59780 193 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PFN3P60673 137 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 STXBP1P61764 594 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ARF6P62330 175 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ARG2P78540 354 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MAB21L1Q13394 359 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 EBI3Q14213 229 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ITIH4Q14624 930 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 C16orf72Q14CZ0 275 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PDK2Q15119 407 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CHRFAM7AQ494W8 412 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SOHLH1Q5JUK2 328 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CDKL4Q5MAI5 379 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 GPR107Q5VW38 600 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 HACD4Q5VWC8 232 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 XKRXQ6PP77 449 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 DUX4L9Q6RFH8 374 aaPredicted RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF767PQ75MW2 155 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 EIF3MQ7L2H7 374 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 VTCN1Q7Z7D3 282 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CMC1Q7Z7K0 106 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SCD5Q86SK9 330 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 LUZP2Q86TE4 346 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 TMEM150AQ86TG1 271 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 LRRC8AQ8IWT6 810 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF561Q8N587 486 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM86B1Q8N7N1 296 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CYB561D1Q8N8Q1 229 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 OR2D3Q8NGH3 330 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 OR10J6PQ8NGY7 276 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 OR2L8Q8NGY9 312 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM172AQ8WUF8 416 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 TM4SF18Q96CE8 201 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ECHDC3Q96DC8 303 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SEH1LQ96EE3 360 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PPP1R36Q96LQ0 422 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PPP3R2Q96LZ3 170 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PPP1R2P1Q96PQ5 205 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 OR2A5Q96R48 311 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PANX1Q96RD7 426 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MICU1Q9BPX6 476 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 C11orf70Q9BRQ4 267 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 COPS4Q9BT78 406 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MND1Q9BWT6 205 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 BCL2L14Q9BZR8 327 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 RPP21Q9H633 154 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CYP3A43Q9HB55 503 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MYOZ1Q9NP98 299 aaPredicted RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 IFT46Q9NQC8 304 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 XPNPEP1Q9NQW7 623 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 NRBP2Q9NSY0 501 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CCDC59Q9P031 241 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 GCNT4Q9P109 453 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PEF1Q9UBV8 284 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 CLEC2DQ9UHP7 191 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ACOT9Q9Y305 439 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 MN1Q10571 1320 aaPredicted RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 NUP155O75694 1391 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 LRPPRCP42704 1394 aaKnown RBP2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF518AQ6AHZ1 1483 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PLB1Q6P1J6 1458 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 ZMYM4Q5VZL5 1548 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 SMARCA4P51532 1647 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 NACAE9PAV3 2078 aa2.3□□□□□ -2.04
HMGXB4-205ENST00000464480 PIKFYVEQ9Y2I7 2098 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 WDR62O43379 1518 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM135AQ9P2D6 1515 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 NCOA2Q15596 1464 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 FANCD2Q9BXW9 1451 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 DAPK1P53355 1430 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 NID2Q14112 1375 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 RFX7Q2KHR2 1363 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 KIAA0232Q92628 1395 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ABCC12Q96J65 1359 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 GMNCA6NCL1 334 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 METTL15A6NJ78 407 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 OR2AT4A6NND4 320 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 LINC00587B1AMM8 73 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 ANKRD63C9JTQ0 380 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 NUPL2O15504 423 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 COCHO43405 550 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 AIREO43918 545 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 EIF1BO60739 113 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 HUS1O60921 280 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 NDUFS6O75380 124 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 OR2F2O95006 317 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 LDOC1O95751 146 aaPredicted RBP2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 IFNA10P01566 189 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CDK1P06493 297 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 SERPINA6P08185 405 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CD3GP09693 182 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CT45A6P0DMU7 189 aa2.29□□□□□ -2.04
HMGXB4-205ENST00000464480 CT45A5P0DMU8 189 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms