RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SNAI3Q3KNW1 292 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 C1orf100Q5SVJ3 147 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 RTL6Q6ICC9 239 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 ZNF529Q6P280 563 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 COLCA1Q6ZS62 124 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 BHLHA15Q7RTS1 189 aaPredicted RBP7.75□□□□□ -1.17
VPS50-207ENST00000458530 MRPL21Q7Z2W9 205 aaKnown RBP7.75□□□□□ -1.17
VPS50-207ENST00000458530 BTLAQ7Z6A9 289 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 MRGPRGQ86SM5 289 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 MDP1Q86V88 176 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 GABRG1Q8N1C3 465 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 FAM169BQ8N8A8 192 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 CPEB3Q8NE35 698 aaKnown RBP7.75□□□□□ -1.17
VPS50-207ENST00000458530 CSNK2A3Q8NEV1 391 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 OR13C9Q8NGT0 318 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 FGFBP3Q8TAT2 258 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 SPSB4Q96A44 273 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 PTX4Q96A99 478 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 FAM3DQ96BQ1 224 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 ORAI1Q96D31 301 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 STARD4Q96DR4 205 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 ADAT3Q96EY9 351 aaPredicted RBP7.75□□□□□ -1.17
VPS50-207ENST00000458530 GPER1Q99527 375 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 GFI1Q99684 422 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 SRRQ9GZT4 340 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 ABCG5Q9H222 651 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 DIABLOQ9NR28 239 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 TUBG2Q9NRH3 451 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 TBCCD1Q9NVR7 557 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 RHBDL2Q9NX52 303 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 B3GNT2Q9NY97 397 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 GHRLQ9UBU3 117 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 KCNN3Q9UGI6 736 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 PIGLQ9Y2B2 252 aa7.75□□□□□ -1.17
VPS50-207ENST00000458530 A0A0A6YYH2 397 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ZNF816-ZNF321PA0A0X1KG74 233 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 hCG_38984A0A1B0GV85 526 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 METTL21EPA6NDL7 271 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 A6NJ64 397 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ZG16O60844 167 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 PAHP00439 452 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 CGAP01215 116 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 EIF4EP06730 217 aaKnown RBP7.74□□□□□ -1.17
VPS50-207ENST00000458530 GLI4P10075 376 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 CD37P11049 281 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ARSBP15848 533 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 CBR1P16152 277 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 RAB6AP20340 208 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ZNF93P35789 620 aaPredicted RBP7.74□□□□□ -1.17
VPS50-207ENST00000458530 POU3F4P49335 361 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 FOXG1P55316 489 aaPredicted RBP7.74□□□□□ -1.17
VPS50-207ENST00000458530 FOXF2Q12947 444 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 OR8B8Q15620 311 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 TRIM16LQ309B1 348 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 C3orf36Q3SXR2 165 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 CLVS2Q5SYC1 327 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 GLYATL3Q5SZD4 288 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 RAB12Q6IQ22 244 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 NAA40Q86UY6 237 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 CXorf67Q86X51 503 aaPredicted RBP7.74□□□□□ -1.17
VPS50-207ENST00000458530 DOLPP1Q86YN1 238 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 Q8N402 240 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ZNF610Q8N9Z0 462 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 C19orf18Q8NEA5 215 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 DNAAF1Q8NEP3 725 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 STEAP2Q8NFT2 490 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 OR4M1Q8NGD0 313 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 SYNPRQ8TBG9 265 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 SGK3Q96BR1 496 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 HAVCR1Q96D42 359 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 MUCL1Q96DR8 90 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 POM121L2Q96KW2 1035 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 LYZL4Q96KX0 146 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 S100A13Q99584 98 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 OPN3Q9H1Y3 402 aaPredicted RBP7.74□□□□□ -1.17
VPS50-207ENST00000458530 ELOVL5Q9NYP7 299 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ZNF319Q9P2F9 582 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 ZNF629Q9UEG4 869 aaPredicted RBP7.74□□□□□ -1.17
VPS50-207ENST00000458530 OR5V1Q9UGF6 321 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 SLC7A11Q9UPY5 501 aa7.74□□□□□ -1.17
VPS50-207ENST00000458530 LOC100509620A0A075B734 347 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 GGT3PA6NGU5 568 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 OR5H1A6NKK0 313 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 PRSS44E7EML9 344 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 E9PLN8 166 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 CTDSPLO15194 276 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 ZNHIT1O43257 154 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 LMX1BO60663 402 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 ICMTO60725 284 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 WISP2O76076 250 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 PTTG1O95997 202 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 SELEP16581 610 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 FAHP16930 419 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 ZNF14P17017 642 aaPredicted RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 PSMB1P20618 241 aaKnown RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 AZGP1P25311 298 aaKnown RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 MNDAP41218 407 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 HGFACQ04756 655 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 P2RY14Q15391 338 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms