RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 METTL11BQ5VVY1 283 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 RTL4Q6ZR62 310 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 BVESQ8NE79 360 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 FAM71CQ8NEG0 241 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 PIGTQ969N2 578 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 MRPL24Q96A35 216 aaKnown RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 FAAP24Q9BTP7 215 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 DERL1Q9BUN8 251 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 OR2B2Q9GZK3 357 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 LILRA5A6NI73 299 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ZNF98A6NK75 572 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 GUSBP08236 651 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 HOXB5P09067 269 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 GAAP10253 952 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 IGFBP3P17936 291 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 HHEXQ03014 270 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 LY6DQ14210 128 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ZNF704Q6ZNC4 412 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 CA5BP1Q8WTZ4 195 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 OR8D1Q8WZ84 308 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 EXTL1Q92935 676 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 TCTN2Q96GX1 697 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 EAF1Q96JC9 268 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 ZCCHC2Q9C0B9 1178 aaKnown RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 GP6Q9HCN6 339 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 TREM2Q9NZC2 230 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 PEX16Q9Y5Y5 336 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 H7C417 338 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ZNF749O43361 778 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 OR2J2O76002 312 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 PRNPP04156 253 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 LRRC25Q8N386 305 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 COX18Q8N8Q8 333 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 HAVCR1Q96D42 359 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 CD180Q99467 661 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 ELOVL1Q9BW60 279 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 MND1Q9BWT6 205 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 MRPL13Q9BYD1 178 aaKnown RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 RPS6KB2Q9UBS0 482 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 MTFP1Q9UDX5 166 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 GDF2Q9UK05 429 aaPredicted RBP4.81□□□□□ -1.64
CD47-201ENST00000355354 PRELID1Q9Y255 219 aa4.81□□□□□ -1.64
CD47-201ENST00000355354 HUWE1Q7Z6Z7 4374 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 TRBV5-7A0A0A0MS05 114 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZNF879B4DU55 563 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 VPS4BO75351 444 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SNRPEP62304 92 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 IL10RAQ13651 578 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.8□□□□□ -1.64
CD47-201ENST00000355354 SCGB2B2Q4G0G5 96 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZNF626Q68DY1 528 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 GLDNQ6ZMI3 551 aaPredicted RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 TMEM182Q6ZP80 229 aaPredicted RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZNF519Q8TB69 540 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ENKURQ8TC29 256 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 Q8TCH9 128 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 GPX8Q8TED1 209 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 PMM1Q92871 262 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 MED30Q96HR3 178 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TP53RKQ96S44 253 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SULT4A1Q9BR01 284 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 GPR34Q9UPC5 381 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 PRR23D1E9PI22 279 aaPredicted RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 AHSA1O95433 338 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TXNDC12O95881 172 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 PRR23D2P0DMB1 279 aaPredicted RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 F2RL1P55085 397 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 DCDP81605 110 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 FUT7Q11130 342 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 FOXF1Q12946 379 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZNF726P1Q15940 193 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TEX30Q5JUR7 227 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TMEM225Q6GV28 225 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 Q6ZQT7 251 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 WDR86Q86TI4 376 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 OR2L8Q8NGY9 312 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 OR13G1Q8NGZ3 307 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 PIGXQ8TBF5 258 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 MYDGFQ969H8 173 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 PAPOLGQ9BWT3 736 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 CENPMQ9NSP4 180 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 CAMK2AQ9UQM7 478 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 RPL36Q9Y3U8 105 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 RYR3Q15413 4870 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TRBV5-5A0A0J9YX44 114 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TMEM150CB9EJG8 249 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 NDUFB6O95139 128 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 OR4E1P0C645 316 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZBTB25P24278 435 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 LAP3P28838 519 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 AKR1D1P51857 326 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SPICQ8N5J4 248 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SETD9Q8NE22 299 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 DMBX1Q8NFW5 382 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 BRIX1Q8TDN6 353 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 C11orf40Q8WZ69 217 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 RBPMSQ93062 196 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 KLHDC7BQ96G42 594 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms