RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 ADAT1Q9BUB4 502 aaKnown RBP8.69□□□□□ -1.02
LIG1-213ENST00000596672 SUCNR1Q9BXA5 334 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 C8orf4Q9NR00 106 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 C1orf123Q9NWV4 160 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 PDP1Q9P0J1 537 aaPredicted RBP8.69□□□□□ -1.02
LIG1-213ENST00000596672 RNF7Q9UBF6 113 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 MIOXQ9UGB7 285 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 RAB26Q9ULW5 256 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 BAIAP2Q9UQB8 552 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 RHBDD3Q9Y3P4 386 aa8.69□□□□□ -1.02
LIG1-213ENST00000596672 ARRDC5A6NEK1 342 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 CCDC182A6NF36 153 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GGT3PA6NGU5 568 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 ZNF878C9JN71 531 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 LGALS8O00214 317 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GLCEO94923 617 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GYPAP02724 150 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 SELLP14151 372 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 POU1F1P28069 291 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GSTT1P30711 240 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GSK3AP49840 483 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 DAPP51397 102 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 DLX1P56177 255 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 FGF12P61328 243 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GNB2P62879 340 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 ACTG1P63261 375 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
LIG1-213ENST00000596672 MALLQ13021 153 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 DMRTC1Q5HYR2 192 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 DCDC5Q6ZRR9 648 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 C9orf139Q6ZV77 190 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 CPOQ8IVL8 374 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 PARP8Q8N3A8 854 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 CYGBQ8WWM9 190 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 GCDHQ92947 438 aaPredicted RBP8.68□□□□□ -1.02
LIG1-213ENST00000596672 NRBF2Q96F24 287 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 INTS14Q96SY0 518 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 RBM4BQ9BQ04 359 aaKnown RBP8.68□□□□□ -1.02
LIG1-213ENST00000596672 NUDT16L1Q9BRJ7 211 aaKnown RBP8.68□□□□□ -1.02
LIG1-213ENST00000596672 OSBPL10Q9BXB5 764 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 OR51V1Q9H2C8 321 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 PRDM13Q9H4Q3 707 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 USE1Q9NZ43 259 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 MRPL15Q9P015 296 aaKnown RBP8.68□□□□□ -1.02
LIG1-213ENST00000596672 OR5V1Q9UGF6 321 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 COPS3Q9UNS2 423 aa8.68□□□□□ -1.02
LIG1-213ENST00000596672 TRAV40A0A0B4J280 105 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 RIIAD1A6NNX1 92 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 MAGEB4O15481 346 aaPredicted RBP8.67□□□□□ -1.02
LIG1-213ENST00000596672 TBX1O43435 398 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 DENRO43583 198 aaKnown RBP8.67□□□□□ -1.02
LIG1-213ENST00000596672 GMDSO60547 372 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 MITFO75030 526 aaPredicted RBP8.67□□□□□ -1.02
LIG1-213ENST00000596672 ALPLP05186 524 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 HKR1P10072 659 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 PRTN3P24158 256 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
LIG1-213ENST00000596672 MED21Q13503 144 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 ARMCX4Q5H9R4 360 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 WDR82Q6UXN9 313 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 DHRSXQ8N5I4 330 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 OR8B3Q8NGG8 313 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 OTOSQ8NHW6 89 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 HPSE2Q8WWQ2 592 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 ERGIC1Q969X5 290 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 REEP6Q96HR9 211 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 OR8B2Q96RD0 313 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 MBOAT4Q96T53 435 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 GABARAPL1Q9H0R8 117 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 SIRPDQ9H106 197 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 WDR13Q9H1Z4 485 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 TOR3AQ9H497 397 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 Q9H521 79 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 SMPD3Q9NY59 655 aaPredicted RBP8.67□□□□□ -1.02
LIG1-213ENST00000596672 KIF17Q9P2E2 1029 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 PCDHGB1Q9Y5G3 927 aa8.67□□□□□ -1.02
LIG1-213ENST00000596672 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 A6NHS1 94 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 LRRC30A6NM36 301 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 H3BN98 237 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 PSMD9O00233 223 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 PHYHO14832 338 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 ADAM20O43506 726 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 ANXA2P07355 339 aaKnown RBP8.66□□□□□ -1.02
LIG1-213ENST00000596672 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 OSMP13725 252 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 ZNF3P17036 446 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 ALOX5APP20292 161 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 FPR2P25090 351 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 DCTDP32321 178 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 CFHR2P36980 270 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 EFNB1P98172 346 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 RELBQ01201 579 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms