RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 LCN1P1Q5VSP4 162 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 DEGS2Q6QHC5 323 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 ZNF841Q6ZN19 808 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 MRPL21Q7Z2W9 205 aaKnown RBP7.26□□□□□ -1.25
SMG6-210ENST00000572205 LRRC28Q86X40 367 aaPredicted RBP7.26□□□□□ -1.25
SMG6-210ENST00000572205 GID4Q8IVV7 300 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 SLC35F2Q8IXU6 374 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 ENTHD1Q8IYW4 607 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 ZNF679Q8IYX0 411 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 GCSAMQ8N6F7 178 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 BVESQ8NE79 360 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 DEFB108BQ8NET1 73 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 OR8J1Q8NGP2 316 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 EGLN1Q9GZT9 426 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 TMEM165Q9HC07 324 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 CLN6Q9NWW5 311 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 NUFIP1Q9UHK0 495 aaKnown RBP7.26□□□□□ -1.25
SMG6-210ENST00000572205 PPP1R3CQ9UQK1 317 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 RHBDD3Q9Y3P4 386 aa7.26□□□□□ -1.25
SMG6-210ENST00000572205 A0A1B0GW55 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 A0A1W2PQL4 384 aaPredicted RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 B4DSR2 109 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 TRAPPC2LH3BP13 241 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 GMDSO60547 372 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 ENTPD6O75354 484 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 WBP4O75554 376 aaKnown RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 ZNF205O95201 554 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 ANXA2P07355 339 aaKnown RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 H2BFMP0C1H6 154 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L2P0CJ85 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L3P0CJ86 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L4P0CJ87 422 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L5P0CJ88 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L6P0CJ89 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L7P0CJ90 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 TNFRSF1AP19438 455 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 AMY2BP19961 511 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 PEX2P28328 305 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 HSD11B1P28845 292 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 PSMB10P40306 273 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 KIR3DL2P43630 455 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 SLC15A1P46059 708 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 CXCR4P61073 352 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 RPS7P62081 194 aaKnown RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 CSNK2BP67870 215 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 MALLQ13021 153 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 ZNF154Q13106 437 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DOC2BQ14184 412 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 ZIK1Q3SY52 487 aaPredicted RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 FAM76BQ5HYJ3 339 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 TMEM42Q69YG0 159 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 LAIR2Q6ISS4 152 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4L9Q6RFH8 374 aaPredicted RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 ZNF322Q6U7Q0 402 aaPredicted RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 ZNF826PQ6ZT77 177 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 OR52H1Q8NGJ2 320 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 OR51G2Q8NGK0 314 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 FAM81AQ8TBF8 368 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 THEM6Q8WUY1 208 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 TMEM186Q96B77 213 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 PLEKHA8Q96JA3 519 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 APOL4Q9BPW4 351 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 TMEM246Q9BRR3 403 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 PRRG3Q9BZD7 231 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 RGCCQ9H4X1 137 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 NIPAL2Q9H841 368 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 PATZ1Q9HBE1 687 aaKnown RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 LPAR2Q9HBW0 351 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 TMEM100Q9NV29 134 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 HIF1ANQ9NWT6 349 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 DUX4Q9UBX2 424 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 WARS2Q9UGM6 360 aaKnown RBP7.25□□□□□ -1.25
SMG6-210ENST00000572205 ENOPH1Q9UHY7 261 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 LAMP5Q9UJQ1 280 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 CDC42EP3Q9UKI2 254 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 KCNS2Q9ULS6 477 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 CMYA5Q8N3K9 4069 aa7.25□□□□□ -1.25
SMG6-210ENST00000572205 PPIAL4EA0A075B759 164 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 PPIAL4CA0A0B4J2A2 164 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 ANKRD65E5RJM6 399 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 PPIAL4DF5H284 164 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 CASQ2O14958 399 aaPredicted RBP7.24□□□□□ -1.25
SMG6-210ENST00000572205 SLC16A6O15403 523 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 ZNF254O75437 659 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 CST4P01036 141 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 WNT2P09544 360 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 PPIAL4FP0DN26 164 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 MDH2P40926 338 aaKnown RBP7.24□□□□□ -1.25
SMG6-210ENST00000572205 MAP2K3P46734 347 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 SRP9P49458 86 aaKnown RBP7.24□□□□□ -1.25
SMG6-210ENST00000572205 ZNF91Q05481 1191 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 EGR3Q06889 387 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 CHRFAM7AQ494W8 412 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 CRIP3Q6Q6R5 217 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 LYPD2Q6UXB3 125 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 WDR82Q6UXN9 313 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 ZNF771Q7L3S4 317 aaPredicted RBP7.24□□□□□ -1.25
SMG6-210ENST00000572205 FAM90A1Q86YD7 464 aa7.24□□□□□ -1.25
SMG6-210ENST00000572205 PRSS35Q8N3Z0 413 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms