RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 FNDC9Q8TBE3 224 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 APH1AQ96BI3 265 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 GAL3ST1Q99999 423 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 GINS4Q9BRT9 223 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 TMEM59Q9BXS4 323 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 CALHM2Q9HA72 323 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 NPDC1Q9NQX5 325 aaPredicted RBP11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 MYEF2Q9P2K5 600 aaKnown RBP11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 KLK13Q9UKR3 277 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 ING4Q9UNL4 249 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 FLVCR2Q9UPI3 526 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 NPTNQ9Y639 398 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 RIF1Q5UIP0 2472 aaKnown RBP11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 WDR87Q6ZQQ6 2873 aa11.04□□□□□ -0.64
AC055717.2-201ENST00000561864 MEIS3P1A6NDR6 274 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 WIPF3A6NGB9 483 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 ZNF736B4DX44 427 aaPredicted RBP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 NKX2-8O15522 239 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 XRCC2O43543 280 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 CREBL2O60519 120 aaPredicted RBP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 MPIG6BO95866 241 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 CD3DP04234 171 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 FCGR2AP12318 317 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 CEACAM1P13688 526 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 PRKACBP22694 351 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 RAD52P43351 418 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 HGFACQ04756 655 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 UBE2V2Q15819 145 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 CDNFQ49AH0 187 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 ZBTB37Q5TC79 503 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 NCCRP1Q6ZVX7 275 aaPredicted RBP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 TMPRSS7Q7RTY8 843 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 FJX1Q86VR8 437 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 TUSC5Q8IXB3 177 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 PIAS4Q8N2W9 510 aaPredicted RBP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 STEAP2Q8NFT2 490 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 OR56B1Q8NGI3 324 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 WDYHV1Q96HA8 205 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 TECTBQ96PL2 329 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 PRDM14Q9GZV8 571 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 LDAHQ9H6V9 325 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 MYOZ1Q9NP98 299 aaPredicted RBP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 ZNF222Q9UK12 451 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 ANAPC10Q9UM13 185 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 LIPGQ9Y5X9 500 aa11.03□□□□□ -0.64
AC055717.2-201ENST00000561864 ZNF891A8MT65 544 aaPredicted RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 DISC1C4P0D8 188 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 PYCARD-AS1I3L0S3 204 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 CRTAPO75718 401 aaPredicted RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 HPXP02790 462 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 HIST1H1DP16402 221 aaKnown RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 PTGFRP43088 359 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 RPS27AP62979 156 aaKnown RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 IFITM2Q01629 132 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 ARL6IP1Q15041 203 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 RSPO4Q2I0M5 234 aaPredicted RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 TMEM42Q69YG0 159 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SEZ6L2Q6UXD5 910 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 FAM89BQ8N5H3 189 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SPICQ8N5J4 248 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 OR4D10Q8NGI6 311 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 CCDC107Q8WV48 283 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 TNFAIP8L1Q8WVP5 186 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SPSB4Q96A44 273 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SPACA5Q96QH8 159 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 TM2D1Q9BX74 207 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 ALX4Q9H161 411 aaPredicted RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SLA2Q9H6Q3 261 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 RANBP3Q9H6Z4 567 aaPredicted RBP11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SLC2A8Q9NY64 477 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SPRR3Q9UBC9 169 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 SCP2D1Q9UJQ7 156 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 ZNF292O60281 2723 aa11.02□□□□□ -0.65
AC055717.2-201ENST00000561864 GVINP1Q7Z2Y8 2422 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 A0A0A6YYD4 124 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 TRAV17A0A0B4J275 112 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 hCG_38984A0A1B0GV85 526 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 UBE2QL1A1L167 161 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 SLC22A20A6NK97 555 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 TM4SF5O14894 197 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 ATP6V1G1O75348 118 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 IGHG3P01860 377 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 AMY2AP04746 511 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 PATE4P0C8F1 98 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 ANXA7P20073 488 aaKnown RBP11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 ARR3P36575 388 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 CBX5P45973 191 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 GNG2P59768 71 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 OR8B8Q15620 311 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 ACTBL2Q562R1 376 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 RNASE10Q5GAN6 216 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms