RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 MAT2BQ9NZL9 334 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CCDC59Q9P031 241 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 RHCGQ9UBD6 479 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 COPS7AQ9UBW8 275 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OSGIN1Q9UJX0 560 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MOKQ9UQ07 419 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OR10H1Q9Y4A9 318 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CLCA3PQ9Y6N3 262 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CDH10Q9Y6N8 788 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SCN3AQ9NY46 2000 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 NINQ8N4C6 2090 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NPIPA5A0A0B4J1W7 369 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 CPSF4LA6NMK7 179 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 NPIPA7E9PJI5 369 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 GTPBP1O00178 669 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 IMPA2O14732 288 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ARPC3O15145 178 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SURF4O15260 269 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 P2RX6O15547 441 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 FGF17O60258 216 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 EIF4E2O60573 245 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 TPST2O60704 377 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 LDB3O75112 727 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 TRIM3O75382 744 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 RDH16O75452 317 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZFAND5O76080 213 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 KCNK2O95069 426 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SCGB1D1O95968 90 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SERPINA3P01011 423 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 CSTAP01040 98 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 HIST1H2ABP04908 130 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NGFRP08138 427 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NPIPA8P0DM63 369 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ADORA3P0DMS8 318 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SAGP10523 405 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZNF3P17036 446 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ADRA2CP18825 462 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 S1PR1P21453 382 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PRTN3P24158 256 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 FKBP2P26885 142 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 EPHA2P29317 976 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 FGF9P31371 208 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 GABRA5P31644 462 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 RANBP1P43487 201 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 MAP2K4P45985 399 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 EMDP50402 254 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 BLVRAP53004 296 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 FOXG1P55316 489 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 WNT4P56705 351 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PRPS1P60891 318 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 BTG2P78543 158 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 HSF2Q03933 536 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZNF155Q12901 538 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 BAMBIQ13145 260 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 TPBGQ13641 420 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SPCS2Q15005 226 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PON3Q15166 354 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR1Q1Q15612 314 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZNF181Q2M3W8 571 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 TRIM16LQ309B1 348 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 KLHL26Q53HC5 615 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PAPPA-AS1Q5QFB9 102 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NCMAPQ5T1S8 102 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 MRPL2Q5T653 305 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 LCN1P1Q5VSP4 162 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PRAMEF20Q5VT98 475 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NXNL2Q5VZ03 156 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 TMEM236Q5W0B7 351 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 GGNBP1Q5YKI7 109 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 FAM205BPQ63HN1 556 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SLC22A10Q63ZE4 541 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 WBP2NLQ6ICG8 309 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SMARCD3Q6STE5 483 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 METAP1DQ6UB28 335 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 ADAMTSL5Q6ZMM2 481 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 DPY19L2P2Q6ZN68 376 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 ZNF620Q6ZNG0 422 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PQLC2Q6ZP29 291 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 HIST3H2AQ7L7L0 130 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 PRSS41Q7RTY9 318 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 P4HA3Q7Z4N8 544 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OAFQ86UD1 273 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 RBM45Q8IUH3 476 aaKnown RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR4N5Q8IXE1 308 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NRMQ8IXM6 262 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 CLIP4Q8N3C7 705 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 MS4A15Q8N5U1 240 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 SIGLECL1Q8N7X8 197 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 POMGNT2Q8NAT1 580 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 C17orf47Q8NEP4 570 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 NFAM1Q8NET5 270 aaPredicted RBP2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR52R1Q8NGF1 315 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR4D11Q8NGI4 311 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR52I1Q8NGK6 324 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR5L2Q8NGL0 311 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR6Q1Q8NGQ2 317 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 OR52N1Q8NH53 320 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 CHPT1Q8WUD6 406 aa2.72□□□□□ -1.97
SPG11-225ENST00000561391 TMEM234Q8WY98 164 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms