RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PCGF1Q9BSM1 259 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 FGF23Q9GZV9 251 aaPredicted RBP13.47□□□□□ -0.25
SCLT1-204ENST00000503215 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 ERVK-18Q9QC07 812 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 MGAM2Q2M2H8 2515 aa13.47□□□□□ -0.25
SCLT1-204ENST00000503215 TRAV38-1A0A0B4J264 116 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-204ENST00000503215 ENSAO43768 121 aaKnown RBP13.46□□□□□ -0.25
SCLT1-204ENST00000503215 RNASE1P07998 156 aaKnown RBP13.46□□□□□ -0.25
SCLT1-204ENST00000503215 H2BFMP0C1H6 154 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-204ENST00000503215 OSMP13725 252 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 MMP9P14780 707 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 ACKR3P25106 362 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 CFHR2P36980 270 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 DDOSTP39656 456 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 NAA10P41227 235 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-204ENST00000503215 CDK5Q00535 292 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 SHFQ7M4L6 423 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 SPATA24Q86W54 205 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 OR1M1Q8NGA1 313 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 OTOSQ8NHW6 89 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 THEM6Q8WUY1 208 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 SLC7A6OSQ96CW6 309 aaPredicted RBP13.46□□□□□ -0.25
SCLT1-204ENST00000503215 PGAM5Q96HS1 289 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 LYZL4Q96KX0 146 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 OPA3Q9H6K4 179 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.25
SCLT1-204ENST00000503215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-204ENST00000503215 DVL1O14640 695 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 FKBP6O75344 327 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 E2F6O75461 281 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 TFF1P04155 84 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 RPSAP08865 295 aaKnown RBP13.45□□□□□ -0.26
SCLT1-204ENST00000503215 AMY2BP19961 511 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 SLC2A5P22732 501 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 MTNR1AP48039 350 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 GK3PQ14409 553 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 WDR82Q6UXN9 313 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 EGFL6Q8IUX8 553 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 CCL13Q99616 98 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 ZNF747Q9BV97 191 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 PAPOLGQ9BWT3 736 aaKnown RBP13.45□□□□□ -0.26
SCLT1-204ENST00000503215 OR10A2Q9H208 303 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 C14orf119Q9NWQ9 140 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 TCRBV3S1A0A5B6 114 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 PRR32B1ATL7 298 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 ZNF879B4DU55 563 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 CLDN34H7C241 214 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 GYG2O15488 501 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 HOXA3O43365 443 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-204ENST00000503215 LYNP07948 512 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 PAICSP22234 425 aaKnown RBP13.45□□□□□ -0.26
SCLT1-204ENST00000503215 OMGP23515 440 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 NPY4RP50391 375 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 GMFBP60983 142 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 FOXL1Q12952 345 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 KCNJ8Q15842 424 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 TEX36Q5VZQ5 186 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 BTN2A1Q7KYR7 527 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 SLC25A28Q96A46 364 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 ITPKCQ96DU7 683 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 SIRPDQ9H106 197 aa13.45□□□□□ -0.26
SCLT1-204ENST00000503215 CENPVL3A0A0U1RRI6 287 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 ZNF850A8MQ14 1090 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 PSMD9O00233 223 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 CDIPTO14735 213 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 TMPRSS2O15393 492 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 SPRY1O43609 319 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-204ENST00000503215 TOX4O94842 621 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 HMGN1P05114 100 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 ALOX5APP20292 161 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 ARF6P62330 175 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 PRB3Q04118 309 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-204ENST00000503215 MZT1Q08AG7 82 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 FLOT2Q14254 428 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 DMRTC1Q5HYR2 192 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 WDR38Q5JTN6 314 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 GPR157Q5UAW9 335 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 CD276Q5ZPR3 534 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 RHOUQ7L0Q8 258 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-204ENST00000503215 FAM216BQ8N7L0 139 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 OR5T2Q8NGG2 359 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 OR8B12Q8NGG6 310 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 RPL3LQ92901 407 aaKnown RBP13.44□□□□□ -0.26
SCLT1-204ENST00000503215 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 WDR13Q9H1Z4 485 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 PRDM13Q9H4Q3 707 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 UNKLQ9H9P5 680 aaKnown RBP13.44□□□□□ -0.26
SCLT1-204ENST00000503215 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 DNAJB9Q9UBS3 223 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 POMPQ9Y244 141 aa13.44□□□□□ -0.26
SCLT1-204ENST00000503215 CCDC182A6NF36 153 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 NDUFA2O43678 99 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 APOC1P02654 83 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 SELLP14151 372 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 DLX1P56177 255 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 PRDX4Q13162 271 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms