RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SLC25A16P16260 332 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 MYL12AP19105 171 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 CCL1P22362 96 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 MED21Q13503 144 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 RIN1Q13671 783 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 KRTAP21-3Q3LHN1 58 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 SPRNQ5BIV9 151 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 FTMTQ8N4E7 242 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 CELF2-AS1Q8N7Q2 184 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 SPERTQ8NA61 448 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 OR2V2Q96R30 315 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 FRRS1LQ9P0K9 344 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 CHD3Q12873 2000 aaKnown RBP22.68■■□□□ 1.22
CCM2-211ENST00000478582 DHRS3O75911 302 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 CST4P01036 141 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 HTR1AP08908 422 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 CCDC159P0C7I6 412 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 CD200P41217 278 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 KIR3DL2P43630 455 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 SRP9P49458 86 aaKnown RBP22.67■■□□□ 1.22
CCM2-211ENST00000478582 TMEM33P57088 247 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 MVKQ03426 396 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 OR8G1Q15617 311 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 ZBTB37Q5TC79 503 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 TMPRSS11AQ6ZMR5 421 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 AHSA2Q719I0 299 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 COMMD2Q86X83 199 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 ZNF540Q8NDQ6 660 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 ITLN1Q8WWA0 313 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 MEGF10Q96KG7 1140 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 SCN3BQ9NY72 215 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 RHBDD3Q9Y3P4 386 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 ZANQ9Y493 2812 aa22.67■■□□□ 1.22
CCM2-211ENST00000478582 F5H5P2 479 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 P2RY10O00398 339 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 NANOS3P60323 173 aaKnown RBP22.66■■□□□ 1.22
CCM2-211ENST00000478582 KRTAP1-1Q07627 177 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 CARTPTQ16568 116 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 DOK3Q7L591 496 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 STX19Q8N4C7 294 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 KLHL36Q8N4N3 616 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 CCDC54Q8NEL0 328 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 SEMA6DQ8NFY4 1073 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 FAM71F1Q96KD3 344 aaPredicted RBP22.66■■□□□ 1.22
CCM2-211ENST00000478582 CNBD2Q96M20 576 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 PIMREGQ9BSJ6 248 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 ADAT1Q9BUB4 502 aaKnown RBP22.66■■□□□ 1.22
CCM2-211ENST00000478582 CHCHD3Q9NX63 227 aaKnown RBP22.66■■□□□ 1.22
CCM2-211ENST00000478582 MPC1Q9Y5U8 109 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 V9GYS6 101 aa22.66■■□□□ 1.22
CCM2-211ENST00000478582 TLN2Q9Y4G6 2542 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 DHRS7CA6NNS2 312 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 DENRO43583 198 aaKnown RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 CDC14BO60729 498 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 PTBP3O95758 552 aaKnown RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 UBCP0CG48 685 aaKnown RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 GATA4P43694 442 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 TGM4P49221 684 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 GBX2P52951 348 aaPredicted RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 RIPPLY1Q0D2K3 151 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 MAB21L1Q13394 359 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 ALKBH1Q13686 389 aaKnown RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 HFEQ30201 348 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 RNLSQ5VYX0 342 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 OR14K1Q8NGZ2 314 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 OR52N1Q8NH53 320 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 Q9H521 79 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 ABCB9Q9NP78 766 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 ZNF275Q9NSD4 429 aaPredicted RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 CLEC2DQ9UHP7 191 aa22.65■■□□□ 1.22
CCM2-211ENST00000478582 NSD1Q96L73 2696 aaPredicted RBP22.65■■□□□ 1.22
CCM2-211ENST00000478582 ZNF816-ZNF321PA0A0X1KG74 233 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 ISG15P05161 165 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 C21orf33P30042 268 aaPredicted RBP22.64■■□□□ 1.21
CCM2-211ENST00000478582 NR4A2P43354 598 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 MZT1Q08AG7 82 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 TMEM244Q5VVB8 128 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 MYDGFQ969H8 173 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 TPRKBQ9Y3C4 175 aa22.64■■□□□ 1.21
CCM2-211ENST00000478582 FN1P02751 2386 aaKnown RBP22.64■■□□□ 1.21
CCM2-211ENST00000478582 HIVEP2P31629 2446 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 A0A096LNT2 108 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.63■■□□□ 1.21
CCM2-211ENST00000478582 A0A1B0GVI7 797 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 OR4C45A6NMZ5 311 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 E9PI62 339 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 CDK1P06493 297 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 GNALP38405 381 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 SLC35A2P78381 396 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 CCDC58Q4VC31 144 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 OR2G6Q5TZ20 316 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 ZNF485Q8NCK3 441 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 ERGIC1Q969X5 290 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 PAPOLGQ9BWT3 736 aaKnown RBP22.63■■□□□ 1.21
CCM2-211ENST00000478582 DUSP21Q9H596 190 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 GCM1Q9NP62 436 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 BABAM2Q9NXR7 383 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 PPP1R3CQ9UQK1 317 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 CACNG2Q9Y698 323 aa22.63■■□□□ 1.21
CCM2-211ENST00000478582 PTGES3LE9PB15 166 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms