RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SIRPDQ9H106 197 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 KAT8Q9H7Z6 458 aaKnown RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 ELOVL3Q9HB03 270 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 CACYBPQ9HB71 228 aaKnown RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 NOX4Q9NPH5 578 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 MAN2C1Q9NTJ4 1040 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 CCDC167Q9P0B6 97 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 EIF3KQ9UBQ5 218 aaKnown RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 DUX4Q9UBX2 424 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 MIOXQ9UGB7 285 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TMCC3Q9ULS5 477 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 SIGLEC9Q9Y336 463 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TIMM10BQ9Y5J6 103 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 USH1CQ9Y6N9 552 aa3.75□□□□□ -1.81
CKS1B-207ENST00000477676 V9GYY5 206 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-207ENST00000477676 TRAV27A0A087WT01 109 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 IGHV1-69DA0A0B4J2H0 117 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 C5orf63A6NC05 138 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF879B4DU55 563 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 MCIDASD6RGH6 385 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FBP2O00757 339 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 PHYHO14832 338 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 DOK2O60496 412 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ENTPD5O75356 428 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 SERPINB7O75635 380 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FSTL3O95633 263 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 IGF2P01344 180 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 IGHV1-69P01742 117 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 HIST1H2ABP04908 130 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ALPLP05186 524 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 COX5BP10606 129 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CTLA4P16410 223 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 MSR1P21757 451 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 PPIBP23284 216 aaKnown RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 OR1E2P47887 323 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 HTR5AP47898 357 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 DAP3P51398 398 aaKnown RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 RAD23AP54725 363 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 RPL27P61353 136 aaKnown RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 COX10Q12887 443 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 TMED1Q13445 227 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 MPPED2Q15777 294 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF181Q2M3W8 571 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 AGKQ53H12 422 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 PLA1AQ53H76 456 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 MESTQ5EB52 335 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 GPR157Q5UAW9 335 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FAM205BPQ63HN1 556 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 C1orf94Q6P1W5 598 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 WDR93Q6P2C0 686 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 BTNL3Q6UXE8 466 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FBXW12Q6X9E4 464 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CCDC80Q76M96 950 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 MEPCEQ7L2J0 689 aaKnown RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 HIST3H2AQ7L7L0 130 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FAM122BQ7Z309 247 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 BCDIN3DQ7Z5W3 292 aaKnown RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 NAA40Q86UY6 237 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CALHM3Q86XJ0 350 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CCDC28AQ8IWP9 274 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 PDZD9Q8IXQ8 264 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 MICU2Q8IYU8 434 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 KIRREL3Q8IZU9 778 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 DPP10Q8N608 796 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 C11orf65Q8NCR3 313 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 BHLHE23Q8NDY6 225 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 OR8G5Q8NG78 346 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 LRRC8CQ8TDW0 803 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 TMEM239Q8WW34 195 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 SSMEM1Q8WWF3 244 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 DYRK2Q92630 601 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 HIST1H2ACQ93077 130 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 PTP4A1Q93096 173 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 LHX4Q969G2 390 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 SGTBQ96EQ0 304 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 THOC1Q96FV9 657 aaKnown RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FAM71F1Q96KD3 344 aaPredicted RBP3.74□□□□□ -1.81
CKS1B-207ENST00000477676 Q96M85 177 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CGREF1Q99674 301 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 HIPK2Q9H2X6 1198 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CENPHQ9H3R5 247 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 C16orf95Q9H693 158 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 WDR76Q9H967 626 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ACOXLQ9NUZ1 547 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 PTTG3PQ9NZH4 202 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 NDUFAF4Q9P032 175 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 CLN8Q9UBY8 286 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 RIMS3Q9UJD0 308 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 A4GNTQ9UNA3 340 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 FOXJ3Q9UPW0 622 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ADAM18Q9Y3Q7 739 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 POMT1Q9Y6A1 747 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
CKS1B-207ENST00000477676 ZNF816-ZNF321PA0A0X1KG74 233 aa3.73□□□□□ -1.81
CKS1B-207ENST00000477676 A6NLC8 198 aa3.73□□□□□ -1.81
CKS1B-207ENST00000477676 IQCF6A8MYZ5 107 aa3.73□□□□□ -1.81
CKS1B-207ENST00000477676 J3KTA2 159 aa3.73□□□□□ -1.81
CKS1B-207ENST00000477676 FXYD1O00168 92 aa3.73□□□□□ -1.81
CKS1B-207ENST00000477676 P2RY10O00398 339 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms