RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 GNGT1P63211 74 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 RELBQ01201 579 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 POU4F2Q12837 409 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 GK3PQ14409 553 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 CDONQ4KMG0 1287 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 OLFML2AQ68BL7 652 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 WDR82Q6UXN9 313 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 FAM57BQ71RH2 274 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 SHFQ7M4L6 423 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 PRSS45Q7RTY3 260 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 SLC36A1Q7Z2H8 476 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 FTMTQ8N4E7 242 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 CSNK2A3Q8NEV1 391 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 TEX47Q8TBZ9 253 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 DYRK2Q92630 601 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 C12orf43Q96C57 262 aaKnown RBP14.44□□□□□ -0.1
COL7A1-208ENST00000470076 OR10A2Q9H208 303 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 RGCCQ9H4X1 137 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 TGP01266 2768 aa14.44□□□□□ -0.1
COL7A1-208ENST00000470076 A0A1B0GVI7 797 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 FAM183AA6NL82 134 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 B2RBV5 119 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 GPR37O15354 613 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 GLCEO94923 617 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 GSTT1P30711 240 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 GSK3AP49840 483 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 ZNF121P58317 390 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-208ENST00000470076 CSNK2BP67870 215 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 TRIM25Q14258 630 aaKnown RBP14.43□□□□□ -0.1
COL7A1-208ENST00000470076 OCLNQ16625 522 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 WDR38Q5JTN6 314 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 LDLRAD3Q86YD5 345 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 GALNT4Q8N4A0 578 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 SCCPDHQ8NBX0 429 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 OR10G2Q8NGC3 310 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 CCL13Q99616 98 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 PAPOLGQ9BWT3 736 aaKnown RBP14.43□□□□□ -0.1
COL7A1-208ENST00000470076 MED20Q9H944 212 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 DNAJC27Q9NZQ0 273 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 PRPF19Q9UMS4 504 aaKnown RBP14.43□□□□□ -0.1
COL7A1-208ENST00000470076 NOTCH1P46531 2555 aa14.43□□□□□ -0.1
COL7A1-208ENST00000470076 ANXA2P2A6NMY6 339 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 H3BN98 237 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-208ENST00000470076 H2BFMP0C1H6 154 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 PAICSP22234 425 aaKnown RBP14.42□□□□□ -0.1
COL7A1-208ENST00000470076 OPRL1P41146 370 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 IL5RAQ01344 420 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 GFOD2Q3B7J2 385 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 KLHL12Q53G59 568 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 TIGD4Q8IY51 512 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 LY6G5BQ8NDX9 201 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 OTULINQ96BN8 352 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 ITPKCQ96DU7 683 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 PGAM5Q96HS1 289 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 NIPSNAP1Q9BPW8 284 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 MICU1Q9BPX6 476 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 TLNRD1Q9H1K6 362 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 ZNF319Q9P2F9 582 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 RHBDD3Q9Y3P4 386 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 MPC1Q9Y5U8 109 aa14.42□□□□□ -0.1
COL7A1-208ENST00000470076 CMYA5Q8N3K9 4069 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 A0A0U1RQK1 487 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 CDIPTO14735 213 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 NDUFB3O43676 98 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 GPR137BO60478 399 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 IGHV4-59P01825 116 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 IER3P46695 156 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 MS4A2Q01362 244 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 SRSF4Q08170 494 aaKnown RBP14.41□□□□□ -0.1
COL7A1-208ENST00000470076 ATPAF1Q5TC12 328 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-208ENST00000470076 BRICD5Q6PL45 260 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 METAP1DQ6UB28 335 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-208ENST00000470076 VMO1Q7Z5L0 202 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-208ENST00000470076 CMTM4Q8IZR5 234 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 IQCF1Q8N6M8 205 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 GIPC3Q8TF64 312 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 NSL1Q96IY1 281 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 AMELYQ99218 206 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 FEVQ99581 238 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 CITED1Q99966 193 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 RTL8AQ9BWD3 113 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 DNTTIP1Q9H147 329 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 ABCB9Q9NP78 766 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 BRD7Q9NPI1 651 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 ONECUT1Q9UBC0 465 aa14.41□□□□□ -0.1
COL7A1-208ENST00000470076 CAB39Q9Y376 341 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-208ENST00000470076 A0A1B0GW55 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 ARRDC5A6NEK1 342 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 ACOT8O14734 319 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 LYNP07948 512 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L2P0CJ85 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L3P0CJ86 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L4P0CJ87 422 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L5P0CJ88 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L6P0CJ89 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L7P0CJ90 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 RAP2AP10114 183 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms