RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 CDS1Q92903 461 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RBPMSQ93062 196 aaKnown RBP0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 NTAN1Q96AB6 310 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 TMIGD2Q96BF3 282 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CENPNQ96H22 339 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ZNF396Q96N95 335 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 GPR82Q96P67 336 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SPACA5Q96QH8 159 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 OR4K3Q96R72 315 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CAMK2N2Q96S95 79 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 TMEM175Q9BSA9 504 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 AGMATQ9BSE5 352 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 NUDT9Q9BW91 350 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SLC17A9Q9BYT1 436 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 FRMD8P1Q9BZ68 369 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ZNF442Q9H7R0 627 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CD209Q9NNX6 404 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 HMG20AQ9NP66 347 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 LHX9Q9NQ69 397 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CYTL1Q9NRR1 136 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 C21orf62Q9NYP8 219 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ZNRD1Q9P1U0 126 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PEF1Q9UBV8 284 aaKnown RBP0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ZNF229Q9UJW7 825 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 GGA2Q9UJY4 613 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CES1P1Q9UKY3 287 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RBMX2Q9Y388 322 aaKnown RBP0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PPIL1Q9Y3C6 166 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 V9GYY9 64 aa0.76□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SLIT3O75094 1523 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SBNO1A3KN83 1393 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CARMIL3Q8ND23 1372 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 LOC102724200A0A096LPH7 203 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 A0A0A6YYD5 115 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 A0A0B4J2E0 115 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 LOC100506127A0A0U1RQW1 187 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 A0A1B0GUH1 482 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 FAM240AA0A1B0GVK7 77 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 LINC00854A0A1B0GVQ3 168 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 C7orf66A4D0T2 115 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 COLCA2A8K830 154 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CENPXA8MT69 81 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CEACAM18A8MTB9 384 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RSPH10B2B2RC85 870 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 LINC01619G3V211 115 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 J3QT63 122 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 DNASE2O00115 360 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 NDUFS8O00217 210 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CHST10O43529 356 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 EIF1BO60739 113 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CCDC22O60826 627 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 TRAPPC6AO75865 159 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SLC22A5O76082 557 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 AQP8O94778 261 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 YIF1AO95070 293 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 VAMP5O95183 116 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PLEKHA8P1O95397 391 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 IGLV2-8P01709 118 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 TRBV12-3P01733 135 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 KLK1P06870 262 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SEC11BP0C7V7 166 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ZNF688P0C7X2 276 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RSPH10BP0C881 870 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RD3LP0DJH9 198 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 HOXB8P17481 243 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 M6PRP20645 277 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ME2P23368 584 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PFN2P35080 140 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 APLNRP35414 380 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 OPRK1P41145 380 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 EIF1P41567 113 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PPICP45877 212 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 GFERP55789 205 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 CLDN18P56856 261 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RPL31P62899 125 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SLC35A1P78382 337 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SLC35B1P78383 322 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 RPL18AQ02543 176 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 LOXL1Q08397 574 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 INCA1Q0VD86 236 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 DYNC1I2Q13409 638 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PNOCQ13519 176 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 EIF4EBP2Q13542 120 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 MOBPQ13875 183 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 EBI3Q14213 229 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 GPR176Q14439 515 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PIGHQ14442 188 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 KIR2DS1Q14954 304 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 MAD2L1BPQ15013 274 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 OR1Q1Q15612 314 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 PGGHGQ32M88 737 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 HNRNPA1L2Q32P51 320 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 SLC25A35Q3KQZ1 300 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 Q3ZCU0 254 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 KLHL12Q53G59 568 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 YIF1BQ5BJH7 314 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 TMEM255AQ5JRV8 349 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 HHATQ5VTY9 493 aa0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 THOC7Q6I9Y2 204 aaKnown RBP0.75□□□□□ -2.29
RNU6-1054P-201ENST00000411293 ULK3Q6PHR2 472 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms