RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 C2orf68Q2NKX9 166 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 XKR4Q5GH76 650 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 WSCD1Q658N2 575 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 TPGS2Q68CL5 300 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 STEAP1BQ6NZ63 245 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 RPL22L1Q6P5R6 122 aaKnown RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 DHRS11Q6UWP2 260 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 ZNF620Q6ZNG0 422 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 RNF144BQ7Z419 303 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 SERPINA9Q86WD7 417 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 CDK20Q8IZL9 346 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 APCDD1Q8J025 514 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 MMP21Q8N119 569 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 PAQR4Q8N4S7 273 aaPredicted RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 FAM24BQ8N5W8 94 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 LMNTD1Q8N9Z9 388 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 TMEM229BQ8NBD8 167 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 OR4E2Q8NGC2 313 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 OR4D9Q8NGE8 314 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 OR52N4Q8NGI2 321 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 OR9A2Q8NGT5 310 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 OR2A12Q8NGT7 310 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 ZCCHC10Q8TBK6 192 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 SLC38A5Q8WUX1 472 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 TMED6Q8WW62 240 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 C22orf15Q8WYQ4 148 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 SMPDL3BQ92485 455 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 DCUN1D4Q92564 292 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 GHSRQ92847 366 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 OTUB2Q96DC9 234 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 PCED1BQ96HM7 432 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 C4orf36Q96KX1 117 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 SAMD8Q96LT4 415 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 ADAD1Q96M93 576 aaKnown RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 PACRGQ96M98 296 aaPredicted RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 SPATA33Q96N06 139 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 ZNF385AQ96PM9 386 aaKnown RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 SUCNR1Q9BXA5 334 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 PLA2G12AQ9BZM1 189 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 NMES1Q9C002 83 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 ACTR3CQ9C0K3 210 aaPredicted RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 TMEM231Q9H6L2 316 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 EGLN3Q9H6Z9 239 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 ISG20L2Q9H9L3 353 aaKnown RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 SGK2Q9HBY8 427 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 SLC17A5Q9NRA2 495 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 BEX4Q9NWD9 120 aaPredicted RBP4.83□□□□□ -1.64
CLK1-202ENST00000409403 HAO2Q9NYQ3 351 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 PITPNC1Q9UKF7 332 aa4.83□□□□□ -1.64
CLK1-202ENST00000409403 SVILO95425 2214 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CENPEQ02224 2701 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 THADAQ6YHU6 1953 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 MTCL1Q9Y4B5 1905 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 TRBV5-4A0A0C4DH59 114 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 A0A1W2PN81 502 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ZNF724A8MTY0 619 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ANKRD66B4E2M5 251 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 J3QLW9 94 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 FOXE1O00358 373 aaPredicted RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 KDELR3O43731 214 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CIDEAO60543 219 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 SRPX2O60687 465 aaPredicted RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 TBX19O60806 448 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ZNF432O94892 652 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 GLCEO94923 617 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 PMP2P02689 132 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 C1QCP02747 245 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 FCGR3AP08637 254 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 FAM157CP0CG43 387 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ZNF19P17023 458 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 TMEM11P17152 192 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 G0S2P27469 103 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 AKT2P31751 481 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CD80P33681 288 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 PRSS3P35030 304 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CHRNA7P36544 502 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CD200P41217 278 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 NSG1P42857 185 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 KHKP50053 298 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 UBE2MP61081 183 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 RAP1BP61224 184 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 STXBP1P61764 594 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 H3F3AP84243 136 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 IHHQ14623 411 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 UBE2V2Q15819 145 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 ZNF674Q2M3X9 581 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 CHRFAM7AQ494W8 412 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 SCGB2B2Q4G0G5 96 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 TMEM35AQ53FP2 167 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 PLEKHS1Q5SXH7 462 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 FAM27D1Q5T7N8 215 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 KHDRBS2Q5VWX1 349 aaKnown RBP4.82□□□□□ -1.64
CLK1-202ENST00000409403 PWWP2BQ6NUJ5 590 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 BTNL8Q6UX41 500 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 UNQ9370/PRO34162Q6UXP9 181 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 UNQ6126/PRO20091Q6UXV3 157 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 SMIM15Q7Z3B0 74 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 RABEPKQ7Z6M1 372 aa4.82□□□□□ -1.64
CLK1-202ENST00000409403 LYG2Q86SG7 212 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms