RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 Q6ZTK2 550 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 TMEM104Q8NE00 496 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 OR2AE1Q8NHA4 323 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 DVL3Q92997 716 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 CMBLQ96DG6 245 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 MED30Q96HR3 178 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 B3GNT2Q9NY97 397 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 GHRLQ9UBU3 117 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF391Q9UJN7 358 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ING4Q9UNL4 249 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 A0A096LPE4 126 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 A0A0A6YYD4 124 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 A0A1W2PPZ6 126 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF891A8MT65 544 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 CDC14BO60729 498 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 MPIG6BO95866 241 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 C1QBP02746 253 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 IL5P05113 134 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 FCGR2AP12318 317 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 RAD52P43351 418 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 FAPQ12884 760 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 FAM189A2Q15884 450 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 METTL11BQ5VVY1 283 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 C1QL2Q7Z5L3 287 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 FJX1Q86VR8 437 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 PIAS4Q8N2W9 510 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 PNLDC1Q8NA58 520 aaKnown RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 OR8S1Q8NH09 359 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 NPRL2Q8WTW4 380 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 SELENOIQ9C0D9 397 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 BANF2Q9H503 90 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ATPIF1Q9UII2 106 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 EP300Q09472 2414 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 A0A1B0GUH1 482 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 SLC22A20A6NK97 555 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 PYCARD-AS1I3L0S3 204 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 RAB3DO95716 219 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 IGHG3P01860 377 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 COX5BP10606 129 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 GNB3P16520 340 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF24P17028 368 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 RCVRNP35243 200 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 GZMKP49863 264 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 TMEM50BP56557 158 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 RBMS2Q15434 407 aaKnown RBP8.34□□□□□ -1.07
TRIM55-201ENST00000276573 GLDNQ6ZMI3 551 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-201ENST00000276573 COLCA1Q6ZS62 124 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 SLC36A1Q7Z2H8 476 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 FGD2Q7Z6J4 655 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 FAM89BQ8N5H3 189 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 OR51S1Q8NGJ8 323 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 CAPSLQ8WWF8 208 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-201ENST00000276573 MS4A3Q96HJ5 214 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 NICN1Q9BSH3 213 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 C1QTNF5Q9BXJ0 243 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 PRDM14Q9GZV8 571 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 RGCCQ9H4X1 137 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 GP6Q9HCN6 339 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 GPR173Q9NS66 373 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 KLK13Q9UKR3 277 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF175Q9Y473 711 aa8.34□□□□□ -1.07
TRIM55-201ENST00000276573 LOC100509620A0A075B734 347 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TRAV17A0A0B4J275 112 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 A0A1W2PP11 408 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF736B4DX44 427 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 SOCS1O15524 211 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 EFSO43281 561 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CRTAPO75718 401 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CEACAM4O75871 244 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CYB5AP00167 134 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 HLA-HP01893 362 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CD74P04233 296 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 GSTP1P09211 210 aaKnown RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF735P0CB33 412 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ERP29P30040 261 aaKnown RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 MRPS15P82914 257 aaKnown RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 FAM3AP98173 230 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 IFITM2Q01629 132 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF92Q03936 586 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 SLC22A6Q4U2R8 563 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TRAPPC6BQ86SZ2 158 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TNFAIP8L1Q8WVP5 186 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 PIGTQ969N2 578 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 SPSB4Q96A44 273 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 GINS4Q9BRT9 223 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 URM1Q9BTM9 101 aaKnown RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TRAF4Q9BUZ4 470 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TMEM59Q9BXS4 323 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 PRSS50Q9UI38 385 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF222Q9UK12 451 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 KCNMB2Q9Y691 235 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 hCG_38984A0A1B0GV85 526 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 M0QYG6 137 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms