RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ABCA3Q99758 1704 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 MRC1P22897 1456 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 PACS2Q86VP3 889 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 NHSL1Q5SYE7 1610 aa18.51■□□□□ 0.55
SEMA3B-214ENST00000619119 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 OAS2P29728 719 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 N4BP2Q86UW6 1770 aaPredicted RBP18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 SEC31AO94979 1220 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 CCDC172P0C7W6 258 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 TMCO3Q6UWJ1 677 aa18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
SEMA3B-214ENST00000619119 LMAN1P49257 510 aa18.49■□□□□ 0.55
SEMA3B-214ENST00000619119 GORABQ5T7V8 394 aa18.49■□□□□ 0.55
SEMA3B-214ENST00000619119 RNF20Q5VTR2 975 aa18.49■□□□□ 0.55
SEMA3B-214ENST00000619119 CKAP2LQ8IYA6 745 aa18.49■□□□□ 0.55
SEMA3B-214ENST00000619119 TYRO3Q06418 890 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 DEF6Q9H4E7 631 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 CBX8Q9HC52 389 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 MRVI1Q9Y6F6 885 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 PARP4Q9UKK3 1724 aaKnown RBP18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 ROBO1Q9Y6N7 1651 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 A0A087WZG4 1122 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 ANO6Q4KMQ2 910 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 PIGBQ92521 554 aa18.48■□□□□ 0.55
SEMA3B-214ENST00000619119 MTX1Q13505 466 aa18.47■□□□□ 0.55
SEMA3B-214ENST00000619119 CCDC34Q96HJ3 373 aa18.47■□□□□ 0.55
SEMA3B-214ENST00000619119 ZSCAN22P10073 491 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-214ENST00000619119 HSP90AB4PQ58FF6 505 aa18.47■□□□□ 0.55
SEMA3B-214ENST00000619119 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-214ENST00000619119 STAP2Q9UGK3 403 aa18.47■□□□□ 0.55
SEMA3B-214ENST00000619119 SKILP12757 684 aa18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 FBXO18Q8NFZ0 1043 aa18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 NOM1Q5C9Z4 860 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 LARP6Q9BRS8 491 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 G3BP1Q13283 466 aaKnown RBP eCLIP18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 AACSQ86V21 672 aa18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 ANO2Q9NQ90 1003 aa18.46■□□□□ 0.55
SEMA3B-214ENST00000619119 RAD50Q92878 1312 aa18.46■□□□□ 0.54
SEMA3B-214ENST00000619119 ATP2B1P20020 1258 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 MAP3K11Q16584 847 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 PLA2G4DQ86XP0 818 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 PLBD2Q8NHP8 589 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 GOLGA5Q8TBA6 731 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 PI4K2BQ8TCG2 481 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 CCDC8Q9H0W5 538 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 ARGLU1Q9NWB6 273 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 PLEKHG2Q9H7P9 1386 aa18.45■□□□□ 0.54
SEMA3B-214ENST00000619119 IFIT2P09913 472 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 CHMLP26374 656 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 LRRC8AQ8IWT6 810 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 ANKRD65E5RJM6 399 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 FILIP1Q7Z7B0 1213 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 AK7Q96M32 723 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 UTYO14607 1347 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 MCCP23508 829 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 DNAJC21Q5F1R6 531 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 ESYT1Q9BSJ8 1104 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 NUP62CLQ9H1M0 184 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 IL25Q9H293 177 aa18.44■□□□□ 0.54
SEMA3B-214ENST00000619119 EXOC5O00471 708 aa18.43■□□□□ 0.54
SEMA3B-214ENST00000619119 SASH1O94885 1247 aa18.43■□□□□ 0.54
SEMA3B-214ENST00000619119 CASTP20810 708 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-214ENST00000619119 CXorf56Q9H5V9 222 aa18.43■□□□□ 0.54
SEMA3B-214ENST00000619119 ZRANB2O95218 330 aaKnown RBP eCLIP18.43■□□□□ 0.54
SEMA3B-214ENST00000619119 STX6O43752 255 aa18.42■□□□□ 0.54
SEMA3B-214ENST00000619119 F13A1P00488 732 aa18.42■□□□□ 0.54
SEMA3B-214ENST00000619119 SYT1P21579 422 aa18.42■□□□□ 0.54
SEMA3B-214ENST00000619119 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.42■□□□□ 0.54
SEMA3B-214ENST00000619119 FAM212AQ96EL1 285 aa18.42■□□□□ 0.54
SEMA3B-214ENST00000619119 TLR7Q9NYK1 1049 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-214ENST00000619119 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
SEMA3B-214ENST00000619119 CCAR2Q8N163 923 aaKnown RBP18.41■□□□□ 0.54
SEMA3B-214ENST00000619119 EAF2Q96CJ1 260 aaPredicted RBP18.41■□□□□ 0.54
SEMA3B-214ENST00000619119 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
SEMA3B-214ENST00000619119 UBXN4Q92575 508 aa18.41■□□□□ 0.54
SEMA3B-214ENST00000619119 MAGEA9P43362 315 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 ERC1Q8IUD2 1116 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 REXO1L1PQ8IX06 675 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 KCPQ6ZWJ8 1503 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 LIG1P18858 919 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 SNW1Q13573 536 aaKnown RBP18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 DNAJC25Q9H1X3 360 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 GLI3P10071 1580 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 SASH3O75995 380 aa18.4■□□□□ 0.54
SEMA3B-214ENST00000619119 LMBR1LQ6UX01 489 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms