RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.45□□□□□ -1.06
SMG1-206ENST00000562668 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
SMG1-206ENST00000562668 GALNT11Q8NCW6 608 aa8.45□□□□□ -1.06
SMG1-206ENST00000562668 GGNBP2Q9H3C7 697 aa8.45□□□□□ -1.06
SMG1-206ENST00000562668 CC2D2AQ9P2K1 1620 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 A6NHS1 94 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 EPHA1P21709 976 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 C8orf34Q49A92 452 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 C1orf127Q8N9H9 656 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 TTC16Q8NEE8 873 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 SALL4Q9UJQ4 1053 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
SMG1-206ENST00000562668 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 NPR3P17342 541 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 CES1P23141 567 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 FAM117BQ6P1L5 589 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 PRR23CQ6ZRP0 262 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.06
SMG1-206ENST00000562668 CARD10Q9BWT7 1032 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 ADAM19Q9H013 955 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 CHRDQ9H2X0 955 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
SMG1-206ENST00000562668 FSCN2O14926 492 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 WISP1O95388 367 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 ACPPP15309 386 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 GLB1P16278 677 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 CDC25BP30305 580 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 CD68P34810 354 aaPredicted RBP8.42□□□□□ -1.06
SMG1-206ENST00000562668 ARTNQ5T4W7 220 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 POP1Q99575 1024 aaKnown RBP8.42□□□□□ -1.06
SMG1-206ENST00000562668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.42□□□□□ -1.06
SMG1-206ENST00000562668 SMARCA4P51532 1647 aa8.42□□□□□ -1.06
SMG1-206ENST00000562668 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
SMG1-206ENST00000562668 TM4SF5O14894 197 aa8.41□□□□□ -1.06
SMG1-206ENST00000562668 FAM13AO94988 1023 aa8.41□□□□□ -1.06
SMG1-206ENST00000562668 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
SMG1-206ENST00000562668 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
SMG1-206ENST00000562668 KLHL23Q8NBE8 558 aa8.41□□□□□ -1.06
SMG1-206ENST00000562668 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
SMG1-206ENST00000562668 H3BRJ5 948 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 LRP8Q14114 963 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 PMEPA1Q969W9 287 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 ZFP64Q9NPA5 681 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 DZANK1Q9NVP4 752 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 KCNK4Q9NYG8 393 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 USTQ9Y2C2 406 aa8.4□□□□□ -1.06
SMG1-206ENST00000562668 NFKBIEO00221 500 aa8.39□□□□□ -1.07
SMG1-206ENST00000562668 USP5P45974 858 aa8.39□□□□□ -1.07
SMG1-206ENST00000562668 CABP4P57796 275 aa8.39□□□□□ -1.07
SMG1-206ENST00000562668 ZNF211Q13398 564 aaPredicted RBP8.39□□□□□ -1.07
SMG1-206ENST00000562668 AAMPQ13685 434 aa8.39□□□□□ -1.07
SMG1-206ENST00000562668 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
SMG1-206ENST00000562668 SEC31BQ9NQW1 1179 aa8.39□□□□□ -1.07
SMG1-206ENST00000562668 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
SMG1-206ENST00000562668 PDE2AO00408 941 aaPredicted RBP8.38□□□□□ -1.07
SMG1-206ENST00000562668 FZD6O60353 706 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 ADAM11O75078 769 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 PHACTR2O75167 634 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 ABL1P00519 1130 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 EHHADHQ08426 723 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 WNT8BQ93098 351 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 HHIPQ96QV1 700 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 CEP41Q9BYV8 373 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 MROH2BQ7Z745 1585 aa8.38□□□□□ -1.07
SMG1-206ENST00000562668 EREGO14944 169 aa8.37□□□□□ -1.07
SMG1-206ENST00000562668 FSTP19883 344 aa8.37□□□□□ -1.07
SMG1-206ENST00000562668 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMG1-206ENST00000562668 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
SMG1-206ENST00000562668 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
SMG1-206ENST00000562668 TMEM102Q8N9M5 508 aaPredicted RBP8.37□□□□□ -1.07
SMG1-206ENST00000562668 UBASH3BQ8TF42 649 aa8.37□□□□□ -1.07
SMG1-206ENST00000562668 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
SMG1-206ENST00000562668 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
SMG1-206ENST00000562668 PEG3Q9GZU2 1588 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 TRPA1O75762 1119 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 EDN3P14138 238 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 KIAA1211Q6ZU35 1233 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 GJD3Q8N144 294 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 UBL7Q96S82 380 aaPredicted RBP8.36□□□□□ -1.07
SMG1-206ENST00000562668 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
SMG1-206ENST00000562668 DDX3YO15523 660 aaKnown RBP8.35□□□□□ -1.07
SMG1-206ENST00000562668 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
SMG1-206ENST00000562668 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
SMG1-206ENST00000562668 OSMRQ99650 979 aa8.35□□□□□ -1.07
SMG1-206ENST00000562668 EGFL7Q9UHF1 273 aa8.35□□□□□ -1.07
SMG1-206ENST00000562668 RNF112Q9ULX5 631 aa8.35□□□□□ -1.07
SMG1-206ENST00000562668 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
SMG1-206ENST00000562668 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
SMG1-206ENST00000562668 AMOTL2Q9Y2J4 779 aa8.34□□□□□ -1.07
SMG1-206ENST00000562668 ATAD2BQ9ULI0 1458 aa8.33□□□□□ -1.08
SMG1-206ENST00000562668 DHX15O43143 795 aaKnown RBP8.33□□□□□ -1.08
SMG1-206ENST00000562668 SLC51AQ86UW1 340 aa8.33□□□□□ -1.08
SMG1-206ENST00000562668 ARMC10Q8N2F6 343 aa8.33□□□□□ -1.08
SMG1-206ENST00000562668 SLC7A3Q8WY07 619 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms