RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 NMRK2Q9NPI5 230 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 NOB1Q9ULX3 412 aaKnown RBP10.41□□□□□ -0.74
RDH11-205ENST00000553816 WDR90Q96KV7 1748 aa10.41□□□□□ -0.74
RDH11-205ENST00000553816 GRM8O00222 908 aa10.4□□□□□ -0.74
RDH11-205ENST00000553816 ALDH1L1O75891 902 aa10.4□□□□□ -0.74
RDH11-205ENST00000553816 NBPF7P0C2Y1 421 aaPredicted RBP10.4□□□□□ -0.74
RDH11-205ENST00000553816 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.74
RDH11-205ENST00000553816 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
RDH11-205ENST00000553816 RPS8P62241 208 aaKnown RBP10.4□□□□□ -0.74
RDH11-205ENST00000553816 CCDC152Q4G0S7 254 aa10.4□□□□□ -0.74
RDH11-205ENST00000553816 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
RDH11-205ENST00000553816 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
RDH11-205ENST00000553816 PSMD1Q99460 953 aa10.4□□□□□ -0.74
RDH11-205ENST00000553816 GPBP1L1Q9HC44 474 aaPredicted RBP10.4□□□□□ -0.74
RDH11-205ENST00000553816 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
RDH11-205ENST00000553816 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
RDH11-205ENST00000553816 CSF1RP07333 972 aa10.39□□□□□ -0.75
RDH11-205ENST00000553816 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
RDH11-205ENST00000553816 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
RDH11-205ENST00000553816 SUCLG2Q96I99 432 aa10.39□□□□□ -0.75
RDH11-205ENST00000553816 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
RDH11-205ENST00000553816 UTYO14607 1347 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 ZNF541Q9H0D2 1346 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 ZNF646O15015 1829 aaPredicted RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 SCN9AQ15858 1988 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 GLTPD2A6NH11 291 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 GPSM2P81274 684 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 AOC3Q16853 763 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 MPNDQ8N594 471 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 GPR101Q96P66 508 aaPredicted RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 RRAGCQ9HB90 399 aa10.38□□□□□ -0.75
RDH11-205ENST00000553816 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
RDH11-205ENST00000553816 SCN4AP35499 1836 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 PSME4Q14997 1843 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
RDH11-205ENST00000553816 POTECB2RU33 542 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 DDNO94850 711 aaPredicted RBP10.37□□□□□ -0.75
RDH11-205ENST00000553816 ITGA6P23229 1130 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 PSEN2P49810 448 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 LMBR1LQ6UX01 489 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 DPP8Q6V1X1 898 aaPredicted RBP10.37□□□□□ -0.75
RDH11-205ENST00000553816 TMC4Q7Z404 712 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 USP44Q9H0E7 712 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
RDH11-205ENST00000553816 FZD9O00144 591 aa10.36□□□□□ -0.75
RDH11-205ENST00000553816 PPIP5K2O43314 1243 aa10.36□□□□□ -0.75
RDH11-205ENST00000553816 TRIM27P14373 513 aa10.36□□□□□ -0.75
RDH11-205ENST00000553816 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
RDH11-205ENST00000553816 ANKRD18AQ8IVF6 992 aa10.36□□□□□ -0.75
RDH11-205ENST00000553816 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
RDH11-205ENST00000553816 ZNF594Q96JF6 807 aaPredicted RBP10.36□□□□□ -0.75
RDH11-205ENST00000553816 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 STK25O00506 426 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 HRO43593 1189 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 KIAA2012Q0VF49 1180 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 ANKRD44Q8N8A2 993 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 TBC1D16Q8TBP0 767 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 TMC2Q8TDI7 906 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
RDH11-205ENST00000553816 CDC5LQ99459 802 aaKnown RBP10.35□□□□□ -0.75
RDH11-205ENST00000553816 API5Q9BZZ5 524 aaKnown RBP10.35□□□□□ -0.75
RDH11-205ENST00000553816 TMX4Q9H1E5 349 aaPredicted RBP10.35□□□□□ -0.75
RDH11-205ENST00000553816 BICC1Q9H694 974 aaKnown RBP10.35□□□□□ -0.75
RDH11-205ENST00000553816 PODXL2Q9NZ53 605 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 MINPP1Q9UNW1 487 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 CHMP3Q9Y3E7 222 aa10.35□□□□□ -0.75
RDH11-205ENST00000553816 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 YDJCA8MPS7 323 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 C6orf229H3BNL8 230 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 SNAP23O00161 211 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 SUPT20HQ8NEM7 779 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 JDP2Q8WYK2 163 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 ARHGAP45Q92619 1136 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 MEIS3Q99687 375 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 KCNQ5Q9NR82 932 aa10.34□□□□□ -0.75
RDH11-205ENST00000553816 BSDC1Q9NW68 430 aaPredicted RBP10.34□□□□□ -0.75
RDH11-205ENST00000553816 ANKRD18BA2A2Z9 1011 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 UFL1O94874 794 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 CCT4P50991 539 aaKnown RBP10.33□□□□□ -0.76
RDH11-205ENST00000553816 C1QTNF8P60827 252 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 CXCL9Q07325 125 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 WASHC4Q2M389 1173 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 RABL6Q3YEC7 729 aaPredicted RBP10.33□□□□□ -0.76
RDH11-205ENST00000553816 INTS3Q68E01 1043 aaKnown RBP10.33□□□□□ -0.76
RDH11-205ENST00000553816 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
RDH11-205ENST00000553816 DBNDD1Q9H9R9 158 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 ANKIB1Q9P2G1 1089 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 ADAMTSL1Q8N6G6 1762 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 XDHP47989 1333 aa10.33□□□□□ -0.76
RDH11-205ENST00000553816 TAF5LO75529 589 aa10.32□□□□□ -0.76
RDH11-205ENST00000553816 RLBP1P12271 317 aa10.32□□□□□ -0.76
RDH11-205ENST00000553816 IGHMBP2P38935 993 aaKnown RBP10.32□□□□□ -0.76
RDH11-205ENST00000553816 CHRNDQ07001 517 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 838.9 ms